RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA493632" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493632 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26601598 26601598 PRJNA493632_P_NODE_665921_length_239_cov_5.614458_g662480_i0 PRJNA493632 665921 239 5.614458 13.41855462 Coemansia sp. RSA 552 2663883 Fungi Fungi 42.7 0.0345   NR KAJ2160556.1 2663883 g662480 i0 32.4 0.853556485355649 68 32 70.3 3 187 20 347 412 KAJ2160556.1 oligosaccharyl transferase glycoprotein complex, beta subunit [Coemansia sp. RSA 552] diamond 204 42.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia sp. RSA 552
30487492 30487492 PRJNA493632_P_NODE_666513_length_239_cov_3.493976_g663072_i0 PRJNA493632 666513 239 3.493976 8.35060264 Linderina pennispora 61395 Fungi Fungi 41.2 0.0461   NR KAJ1936263.1 61395 g663072 i0 37.5 0.602510460251046 48 25 60.3 1 27 170 22 64 KAJ1936263.1 hypothetical protein EC988_008247, partial [Linderina pennispora] diamond 144 41.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;