RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA493632" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9386032 9386032 PRJNA493632_P_NODE_108_length_7208_cov_26.432095_g20_i0 PRJNA493632 108 7208 26.432095 1905.2254076 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2477 0   NR WKU61618.1 3063761 g20 i0 63.4 0.92480577136515 2222 787 91.5 4 6687 94 1 2220 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 6666 2477 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
29192548 29192548 PRJNA493632_P_NODE_520509_length_250_cov_1.305085_g517070_i0 PRJNA493632 520509 250 1.305085 3.2627125 Sobelivirales sp. 2809868 Viruses Viruses 50.8 4.9e-5   NR WRQ64796.1 2809868 g517070 i0 60.5 0.456 38 15 45.6 0 249 136 189 226 WRQ64796.1 hypothetical protein, partial [Sobelivirales sp.] diamond 114 50.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
31008724 31008724 PRJNA493632_P_NODE_499514_length_252_cov_1.670391_g496075_i0 PRJNA493632 499514 252 1.670391 4.20938532 Viruses 10239 Viruses Viruses 47.8 3.17e-4   NR WWV86706.1 1530251 g496075 i0 39.3 1.28571428571429 61 32 66.7 2 240 73 97 157 WWV86706.1 MAG: hypothetical protein, partial [Picornaviridae sp.] diamond 324 48.1 0.993762993762994 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
32273994 32273994 PRJNA493632_P_NODE_334158_length_286_cov_2.164319_g330719_i0 PRJNA493632 334158 286 2.164319 6.18995234 Viruses 10239 Viruses Viruses 58.9 1.34e-7   NR UCS96409.1 1955145 g330719 i0 37.2 3.95454545454545 94 47 98.6 2 285 4 1759 1840 UCS96409.1 MAG: polyprotein [Iflaviridae sp.] diamond 1131 58.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Iflaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;