RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA493632" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28845015 28845015 PRJNA493632_P_NODE_691168_length_230_cov_4.592357_g687727_i0 PRJNA493632 691168 230 4.592357 10.5624211 Puccinia striiformis totivirus 1 2045189 Viruses Viruses 141 4.979999999999999e-37   NR ATO91006.1 2045189 g687727 i0 92.1 0.991304347826087 76 6 99.1 0 230 3 100 175 ATO91006.1 putative capsid protein [Puccinia striiformis totivirus 1] diamond 228 141 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Puccinia striiformis totivirus 1
32763260 32763260 PRJNA493632_P_NODE_536820_length_249_cov_0.875000_g533381_i0 PRJNA493632 536820 249 0.875 2.17875 Hubei toti-like virus 18 1923306 Viruses Viruses 94.7 2.05e-20   NR YP_009336931.1 1923306 g533381 i0 56.3 0.963855421686747 80 35 96.4 0 8 247 1480 1559 YP_009336931.1 hypothetical protein 1 [Hubei toti-like virus 18] diamond 240 94.7 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Lebotiviridae Lebotivirus Lebotivirus roku

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;