RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA493632" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493632 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26918496 26918496 PRJNA493632_P_NODE_595362_length_245_cov_0.895349_g591921_i0 PRJNA493632 595362 245 0.895349 2.19360505 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 61.6 8.47e-9   NR HEX4939996.1 2447898 g591921 i0 51.2 1.00408163265306 82 32 98 4 241 2 417 492 HEX4939996.1 putative Ig domain-containing protein [Candidatus Kapaibacterium sp.] diamond 246 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27266323 27266323 PRJNA493632_P_NODE_554343_length_248_cov_0.880000_g550904_i0 PRJNA493632 554343 248 0.88 2.1824 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 75.5 1.17e-13   NR MCX6147184.1 2447898 g550904 i0 75.6 0.544354838709677 45 11 54.4 0 248 114 697 741 MCX6147184.1 CHASE domain-containing protein [Candidatus Kapaibacterium sp.] diamond 135 75.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27771808 27771808 PRJNA493632_P_NODE_572944_length_247_cov_0.885057_g569505_i0 PRJNA493632 572944 247 0.885057 2.18609079 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 98.6 9.05e-22   NR HPI19430.1 2447898 g569505 i0 47.6 1.96761133603239 82 43 99.6 0 2 247 682 763 HPI19430.1 T9SS type A sorting domain-containing protein [Candidatus Kapaibacterium sp.] diamond 486 98.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31024630 31024630 PRJNA493632_P_NODE_644935_length_242_cov_0.911243_g641494_i0 PRJNA493632 644935 242 0.911243 2.20520806 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 52.4 1.52e-5   NR MBL7993068.1 2447898 g641494 i0 51 1.43801652892562 51 25 63.2 0 153 1 214 264 MBL7993068.1 T9SS type A sorting domain-containing protein [Candidatus Kapaibacterium sp.] diamond 348 52.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;