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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA493632" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA493632 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26887020 26887020 PRJNA493632_P_NODE_531281_length_249_cov_3.090909_g527842_i0 PRJNA493632 531281 249 3.090909 7.69636341 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 72.8 8.92e-13   NR KAJ5070569.1 1746090 g527842 i0 46.9 0.975903614457831 81 40 97.6 1 246 4 46 123 KAJ5070569.1 adp-ribose glycohydrolase arh3 [Anaeramoeba ignava] diamond 243 72.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
27155245 27155245 PRJNA493632_P_NODE_433802_length_265_cov_1.604167_g430363_i0 PRJNA493632 433802 265 1.604167 4.25104255 root 1 Root_unresolved Root_unresolved 44.7 0.0104   NR TNJ28315.1 5742 g430363 i0 43.5 2.08301886792453 46 25 52.1 1 2 139 704 748 TNJ28315.1 ABC transporter, ATP-binding protein [Giardia muris] diamond 552 45.1 0.991130820399113 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
27582025 27582025 PRJNA493632_P_NODE_372404_length_278_cov_1.478049_g368965_i0 PRJNA493632 372404 278 1.478049 4.10897622 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 50.4 1.07e-4   NR KAJ5072181.1 1746090 g368965 i0 34.5 0.938848920863309 87 53 92.8 3 278 21 365 448 KAJ5072181.1 lim domain family [Anaeramoeba ignava] diamond 261 50.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30992897 30992897 PRJNA493632_P_NODE_354614_length_282_cov_1.306220_g351175_i0 PRJNA493632 354614 282 1.30622 3.6835404 Giardia intestinalis 5741 Fornicata other_Eukaryota 43.1 0.043   NR ESU43065.1 5741 g351175 i0 42.1 0.606382978723404 57 30 58.5 2 20 184 267 322 ESU43065.1 Variant-specific surface protein [Giardia intestinalis] diamond 171 43.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31498815 31498815 PRJNA493632_P_NODE_358696_length_281_cov_1.423077_g355257_i0 PRJNA493632 358696 281 1.423077 3.99884637 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 47.4 0.00136   NR XP_001582262.1 412133 g355257 i0 37.2 0.832740213523132 78 45 81.1 2 228 1 39 114 XP_001582262.1 hypothetical protein TVAGG3_0174640 [Trichomonas vaginalis G3] diamond 234 47.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31562034 31562034 PRJNA493632_P_NODE_115596_length_428_cov_3.642254_g112185_i0 PRJNA493632 115596 428 3.642254 15.58884712 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 46.2 0.0137   NR XP_001581087.1 412133 g112185 i0 31.3 0.672897196261682 96 59 65.2 2 141 419 204 295 XP_001581087.1 protein of unknown function (DUF3447) [Trichomonas vaginalis G3] diamond 288 46.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31878169 31878169 PRJNA493632_P_NODE_552057_length_248_cov_0.880000_g548618_i0 PRJNA493632 552057 248 0.88 2.1824 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 66.6 1.56e-10   NR KAJ5073429.1 1746090 g548618 i0 43.2 0.979838709677419 81 46 98 0 5 247 739 819 KAJ5073429.1 alpha-actinin-2 [Anaeramoeba ignava] diamond 243 66.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;