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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8110661 8110661 PRJNA493244_P_NODE_791287_length_512_cov_1.926829_g768634_i0 PRJNA493244 791287 512 1.926829 9.86536448 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 115 3.94e-26   NR KAJ0394519.1 114742 g768634 i0 39.2 7.822265625 166 85 97.3 4 14 511 148 297 KAJ0394519.1 hypothetical protein P43SY_008098 [Pythium insidiosum] diamond 4005 115 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
14485877 14485877 PRJNA493244_P_NODE_526052_length_704_cov_4.331260_g505511_i0 PRJNA493244 526052 704 4.33126 30.4920704 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 2.7099999999999997e-32   NR KAL0587684.1 65357 g505511 i0 52.9 3.69886363636364 119 50 50.7 2 297 653 21 133 KAL0587684.1 hypothetical protein ABG067_002703 [Albugo candida] diamond 2604 124 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
18308809 18308809 PRJNA493244_P_NODE_552335_length_681_cov_1.809677_g531390_i0 PRJNA493244 552335 681 1.809677 12.32390037 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 290 1.99e-93   NR GLD98125.1 114742 g531390 i0 63.5 5.65198237885463 219 75 94.3 3 38 679 110 328 GLD98125.1 hypothetical protein PINS_up006822 [Pythium insidiosum] diamond 3849 290 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
23409982 23409982 PRJNA493244_P_NODE_845779_length_481_cov_9.176190_g822951_i0 PRJNA493244 845779 481 9.17619 44.1374739 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 199 3.73e-62   NR OQR92500.1 1202772 g822951 i0 64.4 2.76923076923077 149 52 92.3 1 31 474 31 179 OQR92500.1 ribosomal protein L27 [Achlya hypogyna] diamond 1332 199 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27171072 27171072 PRJNA493244_P_NODE_1030702_length_393_cov_7.009036_g1007594_i0 PRJNA493244 1030702 393 7.009036 27.54551148 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 120 1.79e-30   NR CCA28267.1 890382 g1007594 i0 52 0.954198473282443 125 54 93.1 2 366 1 61 182 CCA28267.1 predicted protein putative [Albugo laibachii Nc14] diamond 375 120 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
27613730 27613730 PRJNA493244_P_NODE_621664_length_624_cov_3.632327_g599930_i0 PRJNA493244 621664 624 3.632327 22.66572048 Phytophthora boehmeriae 109152 SAR_Eukaryotes SAR_Eukaryotes 78.2 5.97e-13   NR KAG7387716.1 109152 g599930 i0 100 0.206730769230769 43 0 20.7 0 2 130 379 421 KAG7387716.1 hypothetical protein PHYBOEH_008155 [Phytophthora boehmeriae] diamond 129 78.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
27960854 27960854 PRJNA493244_P_NODE_1391965_length_270_cov_3.377990_g1368840_i0 PRJNA493244 1391965 270 3.37799 9.120573 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 55.1 7.83e-7   NR KAF1324798.1 82926 g1368840 i0 40 1.66666666666667 75 36 83.3 1 20 244 110 175 KAF1324798.1 60s ribosomal protein l18a, partial [Globisporangium splendens] diamond 450 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28197684 28197684 PRJNA493244_P_NODE_478766_length_750_cov_2.092888_g458997_i0 PRJNA493244 478766 750 2.092888 15.69666 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 212 1.11e-60   NR XP_067796231.1 4785 g458997 i0 49.5 9.696 202 99 80.8 2 743 138 454 652 XP_067796231.1 Long-chain fatty acid transporter [Phytophthora cinnamomi] diamond 7272 214 0.990654205607477 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
28434531 28434531 PRJNA493244_P_NODE_572646_length_663_cov_5.091362_g551419_i0 PRJNA493244 572646 663 5.091362 33.75573006 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 72.8 1.8e-11   NR DAZ95982.1 4803 g551419 i0 34.2 0.529411764705882 117 68 51.6 3 638 297 133 243 DAZ95982.1 TPA: hypothetical protein N0F65_009283 [Lagenidium giganteum] diamond 351 72.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29019066 29019066 PRJNA493244_P_NODE_1252948_length_311_cov_3.072000_g1229824_i0 PRJNA493244 1252948 311 3.072 9.55392 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00957   NR KAJ0408371.1 114742 g1229824 i0 60 2.27652733118971 35 14 33.8 0 1 105 1173 1207 KAJ0408371.1 hypothetical protein P43SY_003097 [Pythium insidiosum] diamond 708 45.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29413154 29413154 PRJNA493244_P_NODE_1342189_length_284_cov_3.385650_g1319065_i0 PRJNA493244 1342189 284 3.38565 9.615246 Phytophthora aleatoria 2496075 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0178   NR KAG6966395.1 2496075 g1319065 i0 43.8 0.676056338028169 64 33 66.5 2 229 41 547 608 KAG6966395.1 hypothetical protein JG688_00006792 [Phytophthora aleatoria] diamond 192 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora aleatoria
29523990 29523990 PRJNA493244_P_NODE_973110_length_419_cov_1.648045_g950045_i0 PRJNA493244 973110 419 1.648045 6.90530855 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 92 1.66e-18   NR XP_024573668.1 4781 g950045 i0 34.7 3.65155131264916 118 77 84.5 0 356 3 2699 2816 XP_024573668.1 ubiquitin domain containing protein [Plasmopara halstedii] diamond 1530 92 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
29681464 29681464 PRJNA493244_P_NODE_1642210_length_211_cov_7.513333_g1619085_i0 PRJNA493244 1642210 211 7.513333 15.85313263 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79.3 5.34e-16   NR CCI45572.1 65357 g1619085 i0 63.2 4.16587677725119 57 21 81 0 211 41 175 231 CCI45572.1 unnamed protein product [Albugo candida] diamond 879 79.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
29823502 29823502 PRJNA493244_P_NODE_1452071_length_254_cov_9.720207_g1428946_i0 PRJNA493244 1452071 254 9.720207 24.68932578 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.19e-9   NR OQS03247.1 74557 g1428946 i0 50.8 1.42913385826772 61 30 72 0 26 208 7 67 OQS03247.1 hypothetical protein THRCLA_21202 [Thraustotheca clavata] diamond 363 60.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30171121 30171121 PRJNA493244_P_NODE_1194532_length_331_cov_1.303704_g1171408_i0 PRJNA493244 1194532 331 1.303704 4.31526024 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 141 1.46e-39   NR XP_012195351.1 695850 g1171408 i0 82.6 2.34743202416918 86 15 77.9 0 3 260 149 234 XP_012195351.1 GTP-binding nuclear protein Ran [Saprolegnia parasitica CBS 223.65] diamond 777 141 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
30329763 30329763 PRJNA493244_P_NODE_815452_length_498_cov_3.135011_g792719_i0 PRJNA493244 815452 498 3.135011 15.61235478 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 67.4 1.3e-9   NR KAF0699988.1 120398 g792719 i0 53.7 1.96385542168675 54 25 32.5 0 228 67 191 244 KAF0699988.1 hypothetical protein As57867_009431 [Aphanomyces stellatus] diamond 978 67.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
31372278 31372278 PRJNA493244_P_NODE_996096_length_408_cov_24.726225_g973016_i0 PRJNA493244 996096 408 24.726225 100.882998 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 70.9 9.19e-13   NR CAH0478668.1 622444 g973016 i0 51.7 5.05882352941176 60 29 44.1 0 383 204 22 81 CAH0478668.1 unnamed protein product [Peronospora belbahrii] diamond 2064 70.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
31625058 31625058 PRJNA493244_P_NODE_431196_length_800_cov_16.396482_g412343_i0 PRJNA493244 431196 800 16.396482 131.171856 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 202 2.1099999999999998e-60   NR RLN54175.1 325452 g412343 i0 44.8 0.9375 250 131 92.6 4 33 773 22 267 RLN54175.1 hypothetical protein BBP00_00009039 [Phytophthora kernoviae] diamond 750 202 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
32321413 32321413 PRJNA493244_P_NODE_1230679_length_318_cov_7.143969_g1207555_i0 PRJNA493244 1230679 318 7.143969 22.71782142 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 68.6 6.91e-11   NR CAI5722758.1 162125 g1207555 i0 81 0.39622641509434 42 7 38.7 1 296 174 363 404 CAI5722758.1 unnamed protein product [Hyaloperonospora brassicae] diamond 126 68.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
32574471 32574471 PRJNA493244_P_NODE_1559059_length_229_cov_2.333333_g1535934_i0 PRJNA493244 1559059 229 2.333333 5.34333257 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.00669   NR KAE8938987.1 53985 g1535934 i0 32.7 1.70305676855895 55 37 72.1 0 8 172 28 82 KAE8938987.1 hypothetical protein PF009_g11155 [Phytophthora fragariae] diamond 390 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;