RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28276489 28276489 PRJNA493244_P_NODE_367266_length_879_cov_10.913203_g349853_i0 PRJNA493244 367266 879 10.913203 95.92705437 Tomato associated alphaendornavirus 1 2950884 Viruses Viruses 522 3.329999999999999e-166   NR UTQ50503.1 2950884 g349853 i0 89.8 0.969283276450512 284 29 96.9 0 853 2 2599 2882 UTQ50503.1 MAG: polyprotein (domains: helicase - caspase/glycosyltransferase - RNA-dependent RNA polymerase) [Tomato associated alphaendornavirus 1] diamond 852 522 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Tomato associated alphaendornavirus 1
29918632 29918632 PRJNA493244_P_NODE_1222211_length_321_cov_2.961538_g1199087_i0 PRJNA493244 1222211 321 2.961538 9.50653698 Tomato associated alphaendornavirus 1 2950884 Viruses Viruses 209 4.8899999999999997e-60   NR UTQ50503.1 2950884 g1199087 i0 91.5 0.990654205607477 106 9 99.1 0 319 2 1817 1922 UTQ50503.1 MAG: polyprotein (domains: helicase - caspase/glycosyltransferase - RNA-dependent RNA polymerase) [Tomato associated alphaendornavirus 1] diamond 318 209 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Tomato associated alphaendornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;