RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_phylum = "Hofneiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32384372 32384372 PRJNA493244_P_NODE_1261779_length_308_cov_8.777328_g1238655_i0 PRJNA493244 1261779 308 8.777328 27.03417024 Inoviridae sp. 2219103 Viruses Viruses 57.4 5.49e-7   NR XOE96144.1 2219103 g1238655 i0 64.7 0.331168831168831 34 12 33.1 0 306 205 80 113 XOE96144.1 MAG: hypothetical protein [Inoviridae sp.] diamond 102 57.4 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
32636919 32636919 PRJNA493244_P_NODE_468540_length_760_cov_4.251788_g448973_i0 PRJNA493244 468540 760 4.251788 32.3135888 Tubulavirales sp. 2833306 Viruses Viruses 125 1.9299999999999998e-32   NR XOF02939.1 2833306 g448973 i0 88.1 0.26447368421052603 67 8 26.4 0 559 759 1 67 XOF02939.1 MAG: hypothetical protein [Tubulavirales sp.] diamond 201 125 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;