contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23407314 | 23407314 | PRJNA493244_P_NODE_1172639_length_338_cov_3.592058_g1149515_i0 | PRJNA493244 | 1172639 | 338 | 3.592058 | 12.14115604 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 92.4 | 3.69e-21 | NR | HJR67343.1 | 2026741 | g1149515 | i0 | 62.7 | 2.01479289940828 | 75 | 25 | 63.9 | 1 | 336 | 121 | 72 | 146 | HJR67343.1 DUF2214 family protein [Gemmatimonadaceae bacterium] | diamond | 681 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 27282137 | 27282137 | PRJNA493244_P_NODE_1023223_length_397_cov_1.440476_g1000120_i0 | PRJNA493244 | 1023223 | 397 | 1.440476 | 5.71868972 | Longimicrobium | 1804994 | Bacteria | Bacteria | 99 | 4.63e-21 | NR | WP_170034484.1 | 1639882 | g1000120 | i0 | 90 | 0.906801007556675 | 60 | 6 | 45.3 | 0 | 196 | 17 | 1 | 60 | WP_170034484.1 SusC/RagA family TonB-linked outer membrane protein [Longimicrobium terrae] | diamond | 360 | 100 | 0.99 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium terrae | |
| 27803166 | 27803166 | PRJNA493244_P_NODE_1700144_length_204_cov_0.895105_g1677019_i0 | PRJNA493244 | 1700144 | 204 | 0.895105 | 1.8260142 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 92 | 5.55e-20 | NR | HLM69020.1 | 2029185 | g1677019 | i0 | 70.3 | 1.88235294117647 | 64 | 16 | 94.1 | 1 | 204 | 13 | 126 | 186 | HLM69020.1 asparagine synthase C-terminal domain-containing protein [Longimicrobium sp.] | diamond | 384 | 92 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 29176819 | 29176819 | PRJNA493244_P_NODE_1167329_length_340_cov_2.913978_g1144205_i0 | PRJNA493244 | 1167329 | 340 | 2.913978 | 9.9075252 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 144 | 2.65e-39 | NR | MBA2684767.1 | 2026741 | g1144205 | i0 | 60 | 6.48529411764706 | 105 | 42 | 92.6 | 0 | 1 | 315 | 150 | 254 | MBA2684767.1 class I SAM-dependent methyltransferase [Gemmatimonadaceae bacterium] | diamond | 2205 | 144 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30139253 | 30139253 | PRJNA493244_P_NODE_1525792_length_237_cov_1.454545_g1502667_i0 | PRJNA493244 | 1525792 | 237 | 1.454545 | 3.44727165 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 44.3 | 0.00721 | NR | HET7599887.1 | 2448054 | g1502667 | i0 | 72.4 | 0.367088607594937 | 29 | 8 | 36.7 | 0 | 151 | 237 | 13 | 41 | HET7599887.1 translation initiation factor IF-3 [Gemmatimonadales bacterium] | diamond | 87 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30171147 | 30171147 | PRJNA493244_P_NODE_1677352_length_206_cov_2.510345_g1654227_i0 | PRJNA493244 | 1677352 | 206 | 2.510345 | 5.1713107 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 46.6 | 1.87e-4 | NR | HYR12146.1 | 2029185 | g1654227 | i0 | 53.8 | 0.567961165048544 | 39 | 18 | 56.8 | 0 | 148 | 32 | 23 | 61 | HYR12146.1 hypothetical protein [Longimicrobium sp.] | diamond | 117 | 46.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 30550292 | 30550292 | PRJNA493244_P_NODE_1275013_length_304_cov_3.687243_g1251889_i0 | PRJNA493244 | 1275013 | 304 | 3.687243 | 11.20921872 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 74.3 | 5.93e-13 | NR | MDP2957823.1 | 2910168 | g1251889 | i0 | 48.5 | 0.671052631578947 | 68 | 35 | 67.1 | 0 | 6 | 209 | 351 | 418 | MDP2957823.1 hypothetical protein [Longimicrobiales bacterium] | diamond | 204 | 74.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 31783069 | 31783069 | PRJNA493244_P_NODE_1619837_length_216_cov_1.722581_g1596712_i0 | PRJNA493244 | 1619837 | 216 | 1.722581 | 3.72077496 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 77.4 | 1.55e-14 | NR | HEX8274646.1 | 3047548 | g1596712 | i0 | 68.3 | 3.45833333333333 | 63 | 18 | 87.5 | 2 | 27 | 215 | 238 | 298 | HEX8274646.1 asparagine synthase-related protein [Longimicrobiaceae bacterium] | diamond | 747 | 77.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 32731692 | 32731692 | PRJNA493244_P_NODE_1028260_length_394_cov_11.534535_g1005154_i0 | PRJNA493244 | 1028260 | 394 | 11.534535 | 45.4460679 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 198 | 1.61e-61 | NR | HEX5725253.1 | 3047548 | g1005154 | i0 | 77.6 | 5.70304568527919 | 125 | 28 | 95.2 | 0 | 19 | 393 | 1 | 125 | HEX5725253.1 NAD(P)H-dependent oxidoreductase subunit E [Longimicrobiaceae bacterium] | diamond | 2247 | 198 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;