RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493244 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27155217 27155217 PRJNA493244_P_NODE_1551782_length_231_cov_1.505882_g1528657_i0 PRJNA493244 1551782 231 1.505882 3.47858742 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.6 3.81e-16   NR XP_009029846.1 6412 g1528657 i0 61.3 6.54545454545455 62 24 80.5 0 210 25 231 292 XP_009029846.1 hypothetical protein HELRODRAFT_186172 [Helobdella robusta] diamond 1512 82 0.995121951219512 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
27976772 27976772 PRJNA493244_P_NODE_593905_length_646_cov_2.052991_g572441_i0 PRJNA493244 593905 646 2.052991 13.26232186 Metazoa 33208 Annelida Annelida 94.4 1.35e-18   NR CAH1780024.1 6347 g572441 i0 72.1 6.81269349845201 61 17 28.3 0 3 185 208 268 CAH1780024.1 unnamed protein product [Owenia fusiformis] diamond 4401 94.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31467103 31467103 PRJNA493244_P_NODE_1428856_length_260_cov_9.633166_g1405731_i0 PRJNA493244 1428856 260 9.633166 25.0462316 Dimorphilus gyrociliatus 2664684 Annelida Annelida 72.4 1.67e-12   NR CAD5126039.1 2664684 g1405731 i0 55.9 1.36153846153846 59 26 68.1 0 237 61 769 827 CAD5126039.1 unnamed protein product [Dimorphilus gyrociliatus] diamond 354 72.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;