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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 25 ✖

bioproject 1

  • PRJNA493244 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10028398 10028398 PRJNA493244_P_NODE_595788_length_644_cov_4.156089_g574301_i0 PRJNA493244 595788 644 4.156089 26.76521316 Methanolobus sp. 1874737 Archaea Archaea 381 1.23e-131   NR MDY0388867.1 1874737 g574301 i0 86.4 0.992236024844721 213 29 99.2 0 5 643 37 249 MDY0388867.1 site-specific DNA-methyltransferase [Methanolobus sp.] diamond 639 381 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.
11302785 11302785 PRJNA493244_P_NODE_1168869_length_340_cov_1.362007_g1145745_i0 PRJNA493244 1168869 340 1.362007 4.6308238 Natrinema sp. SYSU A 869 2871694 Archaea Archaea 65.1 5.64e-10   NR WP_222913274.1 2871694 g1145745 i0 85.7 0.308823529411765 35 5 30.9 0 110 6 4 38 WP_222913274.1 IS6 family transposase [Natrinema sp. SYSU A 869] diamond 105 65.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema sp. SYSU A 869
20856845 20856845 PRJNA493244_P_NODE_1249517_length_312_cov_4.079681_g1226393_i0 PRJNA493244 1249517 312 4.079681 12.72860472 Methanobacteriaceae archaeon 2099680 Archaea Archaea 83.6 4.11e-17   NR MDD2644230.1 2099680 g1226393 i0 50 0.75 78 39 75 0 291 58 114 191 MDD2644230.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 234 83.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
26759813 26759813 PRJNA493244_P_NODE_1337521_length_286_cov_1.137778_g1314397_i0 PRJNA493244 1337521 286 1.137778 3.25404508 Halococcus sp. 29286 Archaea Archaea 122 4.2000000000000004e-30   NR HET7325121.1 29286 g1314397 i0 57.4 0.986013986013986 94 40 98.6 0 282 1 261 354 HET7325121.1 ABC transporter substrate-binding protein [Halococcus sp.] diamond 282 122 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.
27060793 27060793 PRJNA493244_P_NODE_1385282_length_272_cov_2.374408_g1362157_i0 PRJNA493244 1385282 272 2.374408 6.45838976 Thermococcus 2263 Archaea Archaea 50.1 1.29e-4   NR WP_297421680.1 35749 g1362157 i0 40.8 1.59926470588235 49 29 54 0 149 3 1 49 WP_297421680.1 class I SAM-dependent methyltransferase [Thermococcus sp.] diamond 435 50.1 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
27297743 27297743 PRJNA493244_P_NODE_577663_length_659_cov_3.408027_g556392_i0 PRJNA493244 577663 659 3.408027 22.45889793 Halalkalicoccus sp. 1973143 Archaea Archaea 49.7 0.00229   NR MEM4782468.1 1973143 g556392 i0 42.5 0.537177541729894 40 23 18.2 0 636 517 166 205 MEM4782468.1 lipase maturation factor family protein [Halalkalicoccus sp.] diamond 354 49.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
27471748 27471748 PRJNA493244_P_NODE_803023_length_505_cov_2.966216_g780331_i0 PRJNA493244 803023 505 2.966216 14.9793908 root 1 Root_unresolved Root_unresolved 183 2.569999999999999e-55   NR MEM4196452.1 1884223 g780331 i0 55.5 8.37623762376238 155 66 92.1 1 479 15 2 153 MEM4196452.1 UDP-glucose 4-epimerase GalE [Methanothermobacter sp.] diamond 4230 183 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp.
28071445 28071445 PRJNA493244_P_NODE_477285_length_751_cov_5.163768_g457533_i0 PRJNA493244 477285 751 5.163768 38.77989768 root 1 Root_unresolved Root_unresolved 238 6.259999999999999e-72   NR MBO7212712.1 66852 g457533 i0 80.4 2.83621837549933 143 28 57.1 0 3 431 258 400 MBO7212712.1 hypothetical protein [Methanobrevibacter sp.] diamond 2130 238 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28087072 28087072 PRJNA493244_P_NODE_727205_length_551_cov_2.089796_g704800_i0 PRJNA493244 727205 551 2.089796 11.51477596 Methanobacteriota archaeon 2026739 Archaea Archaea 280 1.47e-93   NR MCH7661910.1 2026739 g704800 i0 85.3 1.63339382940109 150 22 81.7 0 99 548 1 150 MCH7661910.1 hypothetical protein [Methanobacteriota archaeon] diamond 900 280 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28355609 28355609 PRJNA493244_P_NODE_1686346_length_205_cov_1.777778_g1663221_i0 PRJNA493244 1686346 205 1.777778 3.6444449 Natrinema 88723 Archaea Archaea 102 2.12e-23   NR WP_165397000.1 392421 g1663221 i0 62.7 5.88292682926829 67 25 98 0 204 4 404 470 WP_165397000.1 hypothetical protein [Natrinema hispanicum] diamond 1206 103 0.990291262135922 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema hispanicum
28624111 28624111 PRJNA493244_P_NODE_1377467_length_274_cov_4.356808_g1354342_i0 PRJNA493244 1377467 274 4.356808 11.93765392 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 71.6 2.2e-12   NR MDO8725632.1 2032688 g1354342 i0 48.8 1.67518248175182 80 38 86.5 2 252 16 87 164 MDO8725632.1 AP2 domain-containing protein [Candidatus Methanoperedens sp.] diamond 459 71.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29113579 29113579 PRJNA493244_P_NODE_1454988_length_254_cov_1.326425_g1431863_i0 PRJNA493244 1454988 254 1.326425 3.3691195 root 1 Root_unresolved Root_unresolved 155 2.77e-43   NR MBO7731637.1 66852 g1431863 i0 90.5 1.98425196850394 84 8 99.2 0 254 3 69 152 MBO7731637.1 hypothetical protein [Methanobrevibacter sp.] diamond 504 155 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29160906 29160906 PRJNA493244_P_NODE_1018069_length_399_cov_2.082840_g994969_i0 PRJNA493244 1018069 399 2.08284 8.3105316 Methanobrevibacter sp. 66852 Archaea Archaea 195 3.12e-57   NR MBO7212712.1 66852 g994969 i0 83.9 0.842105263157895 112 17 84.2 1 340 5 400 510 MBO7212712.1 hypothetical protein [Methanobrevibacter sp.] diamond 336 195 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29318447 29318447 PRJNA493244_P_NODE_1148929_length_347_cov_1.751748_g1125805_i0 PRJNA493244 1148929 347 1.751748 6.07856556 Candidatus Hydrothermarchaeales archaeon 3107144 Archaea Archaea 43.9 0.0412   NR MEE8167398.1 3107144 g1125805 i0 42.2 0.553314121037464 64 33 55.3 2 63 254 167 226 MEE8167398.1 Fic family protein [Candidatus Hydrothermarchaeales archaeon] diamond 192 43.9 1 Archaea   Methanobacteriati Candidatus Hydrothermarchaeota Candidatus Hydrothermarchaeia Candidatus Hydrothermarchaeales     Candidatus Hydrothermarchaeales archaeon
29633900 29633900 PRJNA493244_P_NODE_1716610_length_202_cov_0.907801_g1693485_i0 PRJNA493244 1716610 202 0.907801 1.83375802 Methanobacteriota archaeon 2026739 Archaea Archaea 115 5.76e-29   NR MDC1420221.1 2026739 g1693485 i0 86.6 0.995049504950495 67 9 99.5 0 1 201 35 101 MDC1420221.1 LLM class flavin-dependent oxidoreductase [Methanobacteriota archaeon] diamond 201 115 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29918628 29918628 PRJNA493244_P_NODE_1102391_length_364_cov_3.369637_g1079269_i0 PRJNA493244 1102391 364 3.369637 12.26547868 Methanobacterium sp. 2164 Archaea Archaea 231 1.2499999999999998e-73   NR HEY0196609.1 2164 g1079269 i0 93.3 0.989010989010989 120 8 98.9 0 362 3 177 296 HEY0196609.1 dihydroorotate dehydrogenase [Methanobacterium sp.] diamond 360 231 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31087508 31087508 PRJNA493244_P_NODE_1480435_length_247_cov_4.069892_g1457310_i0 PRJNA493244 1480435 247 4.069892 10.05263324 Methanobrevibacter arboriphilus 39441 Archaea Archaea 93.2 7.16e-20   NR WP_281845037.1 39441 g1457310 i0 85.1 1.79757085020243 74 11 89.9 0 2 223 24 97 WP_281845037.1 pseudomurein-binding repeat-containing protein [Methanobrevibacter arboriphilus] diamond 444 93.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
31245503 31245503 PRJNA493244_P_NODE_1628175_length_214_cov_2.986928_g1605050_i0 PRJNA493244 1628175 214 2.986928 6.39202592 Methanogenium sp. 2196 Archaea Archaea 55.5 8.08e-7   NR MFA5396911.1 2196 g1605050 i0 41.1 0.785046728971963 56 30 75.7 2 43 204 258 312 MFA5396911.1 hypothetical protein [Methanogenium sp.] diamond 168 55.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
31435207 31435207 PRJNA493244_P_NODE_1526396_length_237_cov_1.227273_g1503271_i0 PRJNA493244 1526396 237 1.227273 2.90863701 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 43.1 0.00584   NR HEY9207112.1 2032688 g1503271 i0 30 0.886075949367089 70 42 88.6 1 6 215 3 65 HEY9207112.1 hypothetical protein [Candidatus Methanoperedens sp.] diamond 210 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
31593668 31593668 PRJNA493244_P_NODE_1753136_length_170_cov_4.458716_g1730011_i0 PRJNA493244 1753136 170 4.458716 7.5798172 Halospeciosus flavus 3032283 Archaea Archaea 41.6 0.0358   NR WP_279529563.1 3032283 g1730011 i0 51.4 0.652941176470588 37 18 65.3 0 6 116 177 213 WP_279529563.1 protoporphyrinogen oxidase [Halospeciosus flavus] diamond 111 41.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halospeciosus Halospeciosus flavus
32163060 32163060 PRJNA493244_P_NODE_1349358_length_282_cov_2.895928_g1326234_i0 PRJNA493244 1349358 282 2.895928 8.16651696 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 54.3 4.12e-6   NR NMC58615.1 2099674 g1326234 i0 44.8 0.617021276595745 58 27 56.4 1 30 188 224 281 NMC58615.1 hypothetical protein [Candidatus Methanofastidiosia archaeon] diamond 174 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
32337307 32337307 PRJNA493244_P_NODE_1699139_length_204_cov_0.895105_g1676014_i0 PRJNA493244 1699139 204 0.895105 1.8260142 root 1 Root_unresolved Root_unresolved 55.1 9.93e-7   NR WP_400244387.1 2173 g1676014 i0 36.5 5.80882352941176 74 39 97.1 1 6 203 497 570 WP_400244387.1 two-component regulator propeller domain-containing protein [Methanobrevibacter smithii] diamond 1185 55.5 0.992792792792793 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
32384403 32384403 PRJNA493244_P_NODE_260939_length_1049_cov_3.553644_g246863_i0 PRJNA493244 260939 1049 3.553644 37.27772556 Methanosarcina sp. 2213 Archaea Archaea 263 7.45e-84   NR HET8689671.1 2213 g246863 i0 59.5 1.29265967588179 227 88 64.1 2 899 228 1 226 HET8689671.1 hypothetical protein [Methanosarcina sp.] diamond 1356 263 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32731726 32731726 PRJNA493244_P_NODE_1653660_length_209_cov_1.729730_g1630535_i0 PRJNA493244 1653660 209 1.72973 3.6151357 Methanobacterium sp. PtaU1.Bin 2164 Archaea Archaea 112 8.67e-30   NR OPY23032.1 1811675 g1630535 i0 91.5 0.84688995215311 59 5 84.7 0 178 2 19 77 OPY23032.1 MAG: response regulator PleD [Methanobacterium sp. PtaU1.Bin097] diamond 177 112 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. PtaU1.Bin097
32778854 32778854 PRJNA493244_P_NODE_1729740_length_199_cov_2.144928_g1706615_i0 PRJNA493244 1729740 199 2.144928 4.26840672 root 1 Root_unresolved Root_unresolved 58.2 2.09e-9   NR MBO7209559.1 66852 g1706615 i0 58.8 2.05025125628141 34 14 51.3 0 103 2 6 39 MBO7209559.1 hypothetical protein [Methanobrevibacter sp.] diamond 408 58.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;