RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA493244" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 26 ✖

bioproject 1

  • PRJNA493244 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1732662 1732662 PRJNA493244_P_NODE_975802_length_417_cov_14.901685_g952735_i0 PRJNA493244 975802 417 14.901685 62.14002645 Acrasis kona 1008807 Heterolobosea other_Eukaryota 114 3.9999999999999994e-28   NR KAL0488965.1 1008807 g952735 i0 52.6 0.683453237410072 95 45 68.3 0 126 410 153 247 KAL0488965.1 Ras-related protein Rac [Acrasis kona] diamond 285 114 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
3008060 3008060 PRJNA493244_P_NODE_586963_length_651_cov_4.703390_g565590_i0 PRJNA493244 586963 651 4.70339 30.6190689 Trypanoplasma borreli 5710 Euglenozoa other_Eukaryota 337 4.58e-112   NR AAF62506.1 5710 g565590 i0 87.1 0.857142857142857 186 24 85.7 0 646 89 230 415 AAF62506.1 ribosomal protein L3 [Trypanoplasma borreli] diamond 558 337 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Trypanoplasma Trypanoplasma borreli
9385263 9385263 PRJNA493244_P_NODE_622428_length_623_cov_10.316726_g600686_i0 PRJNA493244 622428 623 10.316726 64.27320298 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 270 1.65e-89   NR CCW62755.1 479712 g600686 i0 73.6 5.1669341894061 178 47 85.7 0 564 31 1 178 CCW62755.1 unnamed protein product [Phytomonas sp. EM1] diamond 3219 270 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. EM1
10659156 10659156 PRJNA493244_P_NODE_1335449_length_286_cov_2.693333_g1312325_i0 PRJNA493244 1335449 286 2.693333 7.70293238 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 5.88e-28   NR KAL0486315.1 1008807 g1312325 i0 66.7 4.65734265734266 78 26 81.8 0 274 41 345 422 KAL0486315.1 2-amino-3-ketobutyrate coenzyme A ligase [Acrasis kona] diamond 1332 115 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
10660963 10660963 PRJNA493244_P_NODE_572349_length_663_cov_17.272425_g551123_i0 PRJNA493244 572349 663 17.272425 114.51617775 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.7 8.13e-17   NR XP_044547733.1 51637 g551123 i0 57.1 1 77 33 34.8 0 482 252 120 196 XP_044547733.1 uncharacterized protein C9374_005846 [Naegleria lovaniensis] diamond 663 87.4 0.991990846681922 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
17032983 17032983 PRJNA493244_P_NODE_1439374_length_258_cov_1.299492_g1416249_i0 PRJNA493244 1439374 258 1.299492 3.35268936 Acrasis kona 1008807 Heterolobosea other_Eukaryota 131 3.76e-35   NR KAL0491511.1 1008807 g1416249 i0 74.4 0.953488372093023 82 20 94.2 1 257 15 223 304 KAL0491511.1 hypothetical protein AKO1_004011 [Acrasis kona] diamond 246 131 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
26759807 26759807 PRJNA493244_P_NODE_1176101_length_337_cov_2.402174_g1152977_i0 PRJNA493244 1176101 337 2.402174 8.09532638 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 108 1.4e-26   NR NP_066534.1 5762 g1152977 i0 57.5 0.943620178041543 106 45 94.4 0 2 319 92 197 NP_066534.1 ATP synthase F0 subunit 6 [Naegleria gruberi] diamond 318 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26855194 26855194 PRJNA493244_P_NODE_1436661_length_258_cov_6.949239_g1413536_i0 PRJNA493244 1436661 258 6.949239 17.92903662 Andalucia godoyi 505711 Root_unresolved Root_unresolved 40.8 0.0439   NR KAF0853012.1 505711 g1413536 i0 72.7 0.255813953488372 22 6 25.6 0 106 171 63 84 KAF0853012.1 40S small subunit ribosomal protein eS27 (rpS27) [Andalucia godoyi] diamond 66 40.8 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
27613728 27613728 PRJNA493244_P_NODE_565364_length_669_cov_11.909539_g544236_i0 PRJNA493244 565364 669 11.909539 79.67481591 Bodo saltans 75058 Euglenozoa other_Eukaryota 76.6 3.38e-12   NR CUG92267.1 75058 g544236 i0 41.7 0.461883408071749 103 58 45.3 2 656 354 401 503 CUG92267.1 Hypothetical protein, putative [Bodo saltans] diamond 309 76.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28292416 28292416 PRJNA493244_P_NODE_993846_length_409_cov_19.114943_g970766_i0 PRJNA493244 993846 409 19.114943 78.18011687 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 2.28e-17   NR EPY36635.1 59799 g970766 i0 61.9 7.91442542787286 63 24 46.2 0 25 213 37 99 EPY36635.1 small subunit ribosomal protein S18e [Angomonas deanei] diamond 3237 83.2 0.990384615384615 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
28529383 28529383 PRJNA493244_P_NODE_1224947_length_320_cov_3.915058_g1201823_i0 PRJNA493244 1224947 320 3.915058 12.5281856 Acrasis kona 1008807 Heterolobosea other_Eukaryota 102 4.13e-23   NR KAL0490020.1 1008807 g1201823 i0 51 0.95625 102 48 93.8 1 6 305 350 451 KAL0490020.1 INO80 complex subunit D [Acrasis kona] diamond 306 102 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29129359 29129359 PRJNA493244_P_NODE_1576109_length_226_cov_0.860606_g1552984_i0 PRJNA493244 1576109 226 0.860606 1.94496956 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 62.4 3.28e-9   NR XP_067193315.1 715481 g1552984 i0 45.7 3.59734513274336 70 36 90.3 1 10 213 259 328 XP_067193315.1 ABC transporter-like, partial [Trypanosoma melophagium] diamond 813 62.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
29318444 29318444 PRJNA493244_P_NODE_1109589_length_361_cov_11.010000_g1086467_i0 PRJNA493244 1109589 361 11.01 39.7461 Acrasis kona 1008807 Heterolobosea other_Eukaryota 57.8 7.77e-7   NR KAL0478130.1 1008807 g1086467 i0 39.5 1.33795013850416 86 48 69 2 335 87 1038 1122 KAL0478130.1 myosin [Acrasis kona] diamond 483 57.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29350174 29350174 PRJNA493244_P_NODE_1147049_length_347_cov_14.398601_g1123926_i0 PRJNA493244 1147049 347 14.398601 49.96314547 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 54.3 8.54e-6   NR XP_002678540.1 5762 g1123926 i0 42.6 0.406340057636888 47 27 40.6 0 103 243 228 274 XP_002678540.1 uncharacterized protein NAEGRDRAFT_48200 [Naegleria gruberi] diamond 141 54.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29665481 29665481 PRJNA493244_P_NODE_1612890_length_218_cov_1.152866_g1589765_i0 PRJNA493244 1612890 218 1.152866 2.51324788 Bodo saltans 75058 Euglenozoa other_Eukaryota 69.7 8.26e-12   NR CUG93670.1 75058 g1589765 i0 52.8 2.18807339449541 53 25 72.9 0 215 57 426 478 CUG93670.1 membrane-associated protein, putative [Bodo saltans] diamond 477 69.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29902992 29902992 PRJNA493244_P_NODE_1562771_length_228_cov_5.485030_g1539646_i0 PRJNA493244 1562771 228 5.48503 12.5058684 Naegleria 5761 Heterolobosea other_Eukaryota 73.2 7.41e-14   NR XP_002679583.1 5762 g1539646 i0 77.3 1.73684210526316 44 10 57.9 0 95 226 97 140 XP_002679583.1 uncharacterized protein NAEGRDRAFT_38480 [Naegleria gruberi] diamond 396 73.6 0.994565217391304 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30044726 30044726 PRJNA493244_P_NODE_147531_length_1335_cov_9.444270_g138097_i0 PRJNA493244 147531 1335 9.44427 126.0810045 Trypanosoma cruzi marinkellei 85056 Euglenozoa other_Eukaryota 177 1.4599999999999999e-46   NR EKF39072.1 85056 g138097 i0 36.3 0.934831460674157 416 211 90.3 17 1241 36 5 380 EKF39072.1 cysteine protease, putative [Trypanosoma cruzi marinkellei] diamond 1248 177 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
30202609 30202609 PRJNA493244_P_NODE_529112_length_701_cov_5.929688_g508512_i0 PRJNA493244 529112 701 5.929688 41.56711288 Seculamonas ecuadoriensis 221724 Root_unresolved Root_unresolved 184 1.52e-52   NR WCZ58741.1 221724 g508512 i0 52.3 1.64764621968616 193 86 80.9 3 14 580 160 350 WCZ58741.1 60S ribosomal protein L4 [Seculamonas ecuadoriensis] diamond 1155 184 1 Eukaryota Discoba       Jakobida   Seculamonas Seculamonas ecuadoriensis
30518808 30518808 PRJNA493244_P_NODE_663693_length_593_cov_4.951128_g641650_i0 PRJNA493244 663693 593 4.951128 29.36018904 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 107 6.469999999999999e-23   NR XP_002672121.1 5762 g641650 i0 53 1.00674536256324 100 44 49.1 2 302 592 467 566 XP_002672121.1 uncharacterized protein NAEGRDRAFT_44754 [Naegleria gruberi] diamond 597 107 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30756000 30756000 PRJNA493244_P_NODE_1627974_length_214_cov_3.503268_g1604849_i0 PRJNA493244 1627974 214 3.503268 7.49699352 Trypanosoma 5690 Euglenozoa other_Eukaryota 45.8 0.0017   NR KAF8288455.1 5693 g1604849 i0 51 2.78971962616822 49 24 68.7 0 22 168 174 222 KAF8288455.1 putative 60S ribosomal protein L13a [Trypanosoma cruzi] diamond 597 46.2 0.991341991341991 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
30992810 30992810 PRJNA493244_P_NODE_1743754_length_189_cov_2.976562_g1720629_i0 PRJNA493244 1743754 189 2.976562 5.62570218 Bodo saltans 75058 Euglenozoa other_Eukaryota 47.8 3.18e-4   NR CUG93339.1 75058 g1720629 i0 69 0.46031746031746 29 9 46 0 70 156 540 568 CUG93339.1 FAD FMN-binding pyridine nucleotide-disulphide oxidoreductase, putative [Bodo saltans] diamond 87 47.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31656521 31656521 PRJNA493244_P_NODE_1225237_length_320_cov_3.046332_g1202113_i0 PRJNA493244 1225237 320 3.046332 9.7482624 Bodo saltans 75058 Euglenozoa other_Eukaryota 106 1.51e-27   NR CUG89672.1 75058 g1202113 i0 100 3.609375 55 0 51.6 0 23 187 23 77 CUG89672.1 ATPase subunit 9, putative, partial [Bodo saltans] diamond 1155 106 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31814873 31814873 PRJNA493244_P_NODE_374297_length_870_cov_4.791100_g356716_i0 PRJNA493244 374297 870 4.7911 41.68257 Bodo saltans 75058 Euglenozoa other_Eukaryota 241 1.0599999999999998e-73   NR CUG94121.1 75058 g356716 i0 66.5 0.575862068965517 167 52 57.6 1 194 694 222 384 CUG94121.1 peptidase, putative [Bodo saltans] diamond 501 241 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32432103 32432103 PRJNA493244_P_NODE_1677159_length_206_cov_2.648276_g1654034_i0 PRJNA493244 1677159 206 2.648276 5.45544856 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.7 0.00475   NR EKF26575.1 85056 g1654034 i0 52.2 2.35922330097087 46 22 67 0 140 3 55 100 EKF26575.1 chaperone DNAJ protein, putative [Trypanosoma cruzi marinkellei] diamond 486 44.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
32731717 32731717 PRJNA493244_P_NODE_1536460_length_234_cov_3.352601_g1513335_i0 PRJNA493244 1536460 234 3.352601 7.84508634 Bodo saltans 75058 Euglenozoa other_Eukaryota 75.5 9.6e-14   NR CUG92658.1 75058 g1513335 i0 66.7 1.75641025641026 48 16 61.5 0 209 66 874 921 CUG92658.1 Hypothetical protein, putative [Bodo saltans] diamond 411 75.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32904862 32904862 PRJNA493244_P_NODE_759840_length_530_cov_5.130064_g737314_i0 PRJNA493244 759840 530 5.130064 27.1893392 root 1 Root_unresolved Root_unresolved 103 4.47e-25   NR KAJ9455758.1 91374 g737314 i0 67.1 1.35283018867925 76 24 42.5 1 462 238 7 82 KAJ9455758.1 Acyl-CoA-binding protein [Diplonema papillatum] diamond 717 103 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;