RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA492406" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492406 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28560882 28560882 PRJNA492406_P_NODE_6887_length_460_cov_1.591731_g6588_i0 PRJNA492406 6887 460 1.591731 7.3219626 Fusarium culmorum narnavirus 1 3233852 Viruses Viruses 65.5 4.52e-9   NR XCO56019.1 3233852 g6588 i0 28.6 0.958695652173913 147 81 80.9 3 56 427 648 793 XCO56019.1 MAG: putative coat protein [Fusarium culmorum narnavirus 1] diamond 441 65.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales     Fusarium culmorum narnavirus 1
31467047 31467047 PRJNA492406_P_NODE_17476_length_299_cov_0.946903_g17177_i0 PRJNA492406 17476 299 0.946903 2.83123997 Mitoviridae sp. 2809572 Viruses Viruses 145 6.37e-38   NR WAK72382.1 2809572 g17177 i0 67 1.94648829431438 97 32 97.3 0 295 5 460 556 WAK72382.1 MAG: RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 582 145 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;