RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA492406" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492406 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4279664 4279664 PRJNA492406_P_NODE_29184_length_246_cov_1.329480_g28885_i0 PRJNA492406 29184 246 1.32948 3.2705208 Capitella teleta 283909 Annelida Annelida 102 2.6e-25   NR ELU07708.1 283909 g28885 i0 70.1 0.939024390243902 77 22 93.9 1 246 16 114 189 ELU07708.1 hypothetical protein CAPTEDRAFT_151035 [Capitella teleta] diamond 231 102 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
29760385 29760385 PRJNA492406_P_NODE_25671_length_255_cov_1.510989_g25372_i0 PRJNA492406 25671 255 1.510989 3.85302195 Ridgeia piscesae 27915 Annelida Annelida 70.9 5.26e-12   NR KAK2183204.1 27915 g25372 i0 49.4 1.81176470588235 77 37 88.2 1 244 20 47 123 KAK2183204.1 hypothetical protein NP493_320g02019 [Ridgeia piscesae] diamond 462 70.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;