RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA492363" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492363 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25896960 25896960 PRJNA492363_S_NODE_11891_length_282_cov_2.606335_g11070_i0 PRJNA492363 11891 282 2.606335 7.3498647 Caerostris darwini 1538125 Arthropoda Arthropoda 68.6 5.96e-12   NR GIY80821.1 1538125 g11070 i0 43.4 0.882978723404255 83 39 88.3 2 29 277 14 88 GIY80821.1 astacin, partial [Caerostris darwini] diamond 249 68.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Araneidae Caerostris Caerostris darwini
33037884 33037884 PRJNA492363_S_NODE_95268_length_204_cov_0.895105_g94447_i0 PRJNA492363 95268 204 0.895105 1.8260142 Schistocerca gregaria 7010 Arthropoda Arthropoda 89.7 6.21e-19   NR XP_049848600.1 7010 g94447 i0 75.9 3.91176470588235 54 13 79.4 0 163 2 183 236 XP_049848600.1 116 kDa U5 small nuclear ribonucleoprotein component-like [Schistocerca gregaria] diamond 798 89.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Acrididae Schistocerca Schistocerca gregaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;