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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA492280" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492280 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26633197 26633197 PRJNA492280_P_NODE_24481_length_164_cov_2.661417_g24374_i0 PRJNA492280 24481 164 2.661417 4.36472388 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 49.7 2.5e-5   NR HVY70133.1 2499141 g24374 i0 56.8 0.804878048780488 44 19 80.5 0 2 133 53 96 HVY70133.1 ECF-type sigma factor [Verrucomicrobiia bacterium] diamond 132 49.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
26776081 26776081 PRJNA492280_P_NODE_21161_length_164_cov_3.133858_g21054_i0 PRJNA492280 21161 164 3.133858 5.13952712 Pedosphaera 1032526 Bacteria Bacteria 77.4 5.89e-15   NR MSU04578.1 2024890 g21054 i0 61 2.81707317073171 77 7 98.8 1 2 163 43 119 MSU04578.1 hypothetical protein [Pedosphaera sp.] diamond 462 77.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera sp.
26823382 26823382 PRJNA492280_P_NODE_12461_length_164_cov_6.480315_g12354_i0 PRJNA492280 12461 164 6.480315 10.6277166 Pedosphaera sp. 2024890 Bacteria Bacteria 49.7 4.56e-5   NR MSU04772.1 2024890 g12354 i0 100 0.439024390243902 24 0 43.9 0 160 89 817 840 MSU04772.1 hypothetical protein [Pedosphaera sp.] diamond 72 49.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera sp.
27044795 27044795 PRJNA492280_P_NODE_23462_length_164_cov_2.803150_g23355_i0 PRJNA492280 23462 164 2.80315 4.597166 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 55.5 4.11e-7   NR RFC45908.1 2026799 g23355 i0 75.7 2.70731707317073 37 8 67.7 1 162 52 155 190 RFC45908.1 MAG: beta-propeller fold [Verrucomicrobiota bacterium] diamond 444 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27629667 27629667 PRJNA492280_P_NODE_32804_length_150_cov_5.008850_g32697_i0 PRJNA492280 32804 150 5.00885 7.513275 Prosthecobacter 48463 Bacteria Bacteria 47.4 2.41e-4   NR MBV6501187.1 1965333 g32697 i0 95.8 4.82 24 1 48 0 149 78 579 602 MBV6501187.1 hypothetical protein [Prosthecobacter sp.] diamond 723 47.8 0.99163179916318 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
27960791 27960791 PRJNA492280_P_NODE_15805_length_164_cov_4.299213_g15698_i0 PRJNA492280 15805 164 4.299213 7.05070932 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.5 1.16e-4   NR MEI7773390.1 2026799 g15698 i0 91.7 1.31707317073171 24 2 43.9 0 91 162 579 602 MEI7773390.1 thioredoxin domain-containing protein [Verrucomicrobiota bacterium] diamond 216 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28181572 28181572 PRJNA492280_P_NODE_33486_length_150_cov_3.955752_g33379_i0 PRJNA492280 33486 150 3.955752 5.933628 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.1 0.00756   NR TMQ01562.1 2026799 g33379 i0 62.5 0.48 24 9 48 0 77 148 94 117 TMQ01562.1 MAG: DUF1080 domain-containing protein [Verrucomicrobiota bacterium] diamond 72 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28560839 28560839 PRJNA492280_P_NODE_14907_length_164_cov_4.622047_g14800_i0 PRJNA492280 14907 164 4.622047 7.58015708 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 52 6.88e-6   NR MEN9403412.1 2026799 g14800 i0 92 0.457317073170732 25 2 45.7 0 163 89 33 57 MEN9403412.1 Inositol 2-dehydrogenase [Verrucomicrobiota bacterium] diamond 75 52 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28655520 28655520 PRJNA492280_P_NODE_26787_length_163_cov_3.912698_g26680_i0 PRJNA492280 26787 163 3.912698 6.37769774 Prosthecobacter sp. 1965333 Bacteria Bacteria 50.1 1.5e-6   NR WP_294232248.1 1965333 g26680 i0 100 0.404907975460123 22 0 40.5 0 90 155 30 51 WP_294232248.1 hypothetical protein [Prosthecobacter sp.] diamond 66 50.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29003188 29003188 PRJNA492280_P_NODE_14948_length_164_cov_4.606299_g14841_i0 PRJNA492280 14948 164 4.606299 7.55433036 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.1 1.6e-4   NR MBM3865737.1 2026799 g14841 i0 63.2 0.695121951219512 38 10 62.2 1 61 162 737 774 MBM3865737.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 114 48.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29523966 29523966 PRJNA492280_P_NODE_19750_length_164_cov_3.377953_g19643_i0 PRJNA492280 19750 164 3.377953 5.53984292 Pseudomonadati 3379134 Bacteria Bacteria 62 2.03e-9   NR WP_294383978.1 1965333 g19643 i0 59.6 3.64024390243902 52 20 93.3 1 4 156 328 379 WP_294383978.1 DUF1553 domain-containing protein [Prosthecobacter sp.] diamond 597 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29665420 29665420 PRJNA492280_P_NODE_31210_length_151_cov_3.324561_g31103_i0 PRJNA492280 31210 151 3.324561 5.02008711 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 48.5 9.77e-5   NR HEV7403119.1 2811408 g31103 i0 46 5.14569536423841 63 16 89.4 1 147 13 736 798 HEV7403119.1 carbohydrate binding domain-containing protein [Chthoniobacteraceae bacterium] diamond 777 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
29681447 29681447 PRJNA492280_P_NODE_22750_length_164_cov_2.897638_g22643_i0 PRJNA492280 22750 164 2.897638 4.75212632 Bacteria 2 Bacteria Bacteria 84.7 1.26e-17   NR MEY2466629.1 2026799 g22643 i0 84.9 5.81707317073171 53 7 97 1 3 161 34 85 MEY2466629.1 pyruvate kinase [Verrucomicrobiota bacterium] diamond 954 85.5 0.990643274853801 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29966095 29966095 PRJNA492280_P_NODE_23331_length_164_cov_2.818898_g23224_i0 PRJNA492280 23331 164 2.818898 4.62299272 Bacteria 2 Bacteria Bacteria 86.7 1.05e-18   NR HUR56723.1 2006848 g23224 i0 65.7 7.35365853658537 67 10 98.8 1 1 162 217 283 HUR56723.1 NAD(P)-dependent oxidoreductase [Opitutaceae bacterium] diamond 1206 86.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
29981626 29981626 PRJNA492280_P_NODE_22511_length_164_cov_2.929134_g22404_i0 PRJNA492280 22511 164 2.929134 4.80377976 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.1 1.57e-4   NR KAB2653290.1 2026799 g22404 i0 61.9 2.03048780487805 42 16 76.8 0 130 5 26 67 KAB2653290.1 MAG: type IV pilus twitching motility protein PilT [Verrucomicrobiota bacterium] diamond 333 48.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30314102 30314102 PRJNA492280_P_NODE_26032_length_164_cov_2.244094_g25925_i0 PRJNA492280 26032 164 2.244094 3.68031416 Prosthecobacter 48463 Bacteria Bacteria 54.3 1.8e-7   NR WP_294404807.1 1965333 g25925 i0 53 2.41463414634146 66 6 75 1 127 5 12 77 WP_294404807.1 aspartate 1-decarboxylase [Prosthecobacter sp.] diamond 396 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30345718 30345718 PRJNA492280_P_NODE_32452_length_150_cov_6.159292_g32345_i0 PRJNA492280 32452 150 6.159292 9.238938 Bacteria 2 Bacteria Bacteria 41.6 0.02   NR MEY5015909.1 2026799 g32345 i0 69.2 0.98 26 8 52 0 80 3 98 123 MEY5015909.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 147 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30708235 30708235 PRJNA492280_P_NODE_19014_length_164_cov_3.496063_g18907_i0 PRJNA492280 19014 164 3.496063 5.73354332 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 41.2 0.043   NR MFN0129558.1 2026801 g18907 i0 78.3 0.420731707317073 23 5 42.1 0 6 74 198 220 MFN0129558.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 69 41.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30771663 30771663 PRJNA492280_P_NODE_33554_length_150_cov_3.876106_g33447_i0 PRJNA492280 33554 150 3.876106 5.814159 Rariglobus sp. 2706526 Bacteria Bacteria 62 1.62e-9   NR MDF3056361.1 2706526 g33447 i0 64.4 0.9 45 16 90 0 6 140 192 236 MDF3056361.1 alpha-L-rhamnosidase [Rariglobus sp.] diamond 135 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
30929477 30929477 PRJNA492280_P_NODE_8174_length_185_cov_3.432432_g8067_i0 PRJNA492280 8174 185 3.432432 6.3499992 Prosthecobacter sp. 1965333 Bacteria Bacteria 59.7 1.66e-8   NR MEZ5385719.1 1965333 g8067 i0 93.5 0.502702702702703 31 2 50.3 0 18 110 13 43 MEZ5385719.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Prosthecobacter sp.] diamond 93 59.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30945619 30945619 PRJNA492280_P_NODE_25614_length_164_cov_2.425197_g25507_i0 PRJNA492280 25614 164 2.425197 3.97732308 Pseudomonadati 3379134 Bacteria Bacteria 54.3 1.05e-6   NR MBC8010073.1 2006848 g25507 i0 95.8 16.9573170731707 24 1 43.9 0 92 163 108 131 MBC8010073.1 DUF3604 domain-containing protein [Opitutaceae bacterium] diamond 2781 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31830612 31830612 PRJNA492280_P_NODE_23177_length_164_cov_2.834646_g23070_i0 PRJNA492280 23177 164 2.8346460000000002 4.64881944 Bacteria 2 Bacteria Bacteria 55.5 4.15e-7   NR MFO1457948.1 2026799 g23070 i0 100 0.878048780487805 24 0 43.9 0 162 91 265 288 MFO1457948.1 immunoglobulin domain-containing protein [Verrucomicrobiota bacterium] diamond 144 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32004658 32004658 PRJNA492280_P_NODE_32258_length_150_cov_7.371681_g32151_i0 PRJNA492280 32258 150 7.371681 11.0575215 Opitutaceae bacterium TAV4 278959 Bacteria Bacteria 66.2 5.4e-11   NR RRJ94455.1 278959 g32151 i0 47.6 3.36 84 8 96 2 147 4 314 397 RRJ94455.1 hypothetical protein Ga0100231_008930 [Opitutaceae bacterium TAV4] diamond 504 66.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium TAV4
32067790 32067790 PRJNA492280_P_NODE_20358_length_164_cov_3.275591_g20251_i0 PRJNA492280 20358 164 3.275591 5.37196924 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 43.9 0.00498   NR HYG83803.1 2499141 g20251 i0 100 0.768292682926829 20 0 36.6 0 73 14 160 179 HYG83803.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 126 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32226272 32226272 PRJNA492280_P_NODE_13798_length_164_cov_5.181102_g13691_i0 PRJNA492280 13798 164 5.181102 8.49700728 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 54.7 7.66e-7   NR KAB2661166.1 2026799 g13691 i0 100 0.439024390243902 24 0 43.9 0 6 77 389 412 KAB2661166.1 MAG: DUF1552 domain-containing protein [Verrucomicrobiota bacterium] diamond 72 54.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32432086 32432086 PRJNA492280_P_NODE_14519_length_164_cov_4.779528_g14412_i0 PRJNA492280 14519 164 4.779528 7.83842592 Bacteria 2 Bacteria Bacteria 45.1 0.00192   NR HUF42920.1 2499141 g14412 i0 88 0.896341463414634 25 3 45.7 0 162 88 293 317 HUF42920.1 ABC transporter substrate-binding protein [Verrucomicrobiia bacterium] diamond 147 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32511200 32511200 PRJNA492280_P_NODE_32499_length_150_cov_5.911504_g32392_i0 PRJNA492280 32499 150 5.911504 8.867256 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 92.4 3.2e-20   NR KAB2661199.1 2026799 g32392 i0 84.2 1.14 57 0 96 1 6 149 606 662 KAB2661199.1 MAG: 4Fe-4S dicluster domain-containing protein [Verrucomicrobiota bacterium] diamond 171 92.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;