RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA489308" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA489308 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29003151 29003151 PRJNA489308_P_NODE_29248_length_255_cov_1.269231_g29172_i0 PRJNA489308 29248 255 1.269231 3.23653905 Candidatus Caenarcanales bacterium 2729995 Bacteria Bacteria 81.6 8.18e-17   NR HEY9847790.1 2729995 g29172 i0 49.4 1.82352941176471 77 36 89.4 2 2 229 139 213 HEY9847790.1 class I SAM-dependent methyltransferase [Candidatus Caenarcanales bacterium] diamond 465 81.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Candidatus Caenarcanales     Candidatus Caenarcanales bacterium
29633783 29633783 PRJNA489308_P_NODE_2190_length_651_cov_2.107266_g2115_i0 PRJNA489308 2190 651 2.107266 13.71830166 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 49.7 0.00288   NR MBI3591571.1 2052166 g2115 i0 43.9 0.304147465437788 66 26 27.6 3 257 436 195 255 MBI3591571.1 hypothetical protein [Candidatus Melainabacteria bacterium] diamond 198 49.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
30392754 30392754 PRJNA489308_P_NODE_12353_length_333_cov_1.184615_g12277_i0 PRJNA489308 12353 333 1.184615 3.94476795 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 68.2 1.3099999999999999e-10   NR MBL0188885.1 2711154 g12277 i0 40.2 1.65765765765766 92 50 79.3 2 46 309 152 242 MBL0188885.1 protein kinase [Candidatus Obscuribacter sp.] diamond 552 68.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;