contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA488043" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26696386 | 26696386 | PRJNA488043_P_NODE_15401_length_222_cov_2.031088_g13159_i0 | PRJNA488043 | 15401 | 222 | 2.031088 | 4.50901536 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 76.3 | 1.34e-14 | NR | MBK7421585.1 | 70125 | g13159 | i0 | 100 | 1.44594594594595 | 36 | 0 | 48.6 | 0 | 115 | 222 | 1 | 36 | MBK7421585.1 hypothetical protein [Nitrospira sp.] | diamond | 321 | 76.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26791593 | 26791593 | PRJNA488043_P_NODE_13721_length_248_cov_2.319635_g11479_i0 | PRJNA488043 | 13721 | 248 | 2.319635 | 5.7526948 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 96.7 | 1.94e-21 | NR | HMV57845.1 | 70125 | g11479 | i0 | 57.3 | 0.991935483870968 | 82 | 35 | 99.2 | 0 | 2 | 247 | 71 | 152 | HMV57845.1 Clp protease ClpP [Nitrospira sp.] | diamond | 246 | 96.7 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26823328 | 26823328 | PRJNA488043_P_NODE_7461_length_442_cov_2.944310_g5312_i0 | PRJNA488043 | 7461 | 442 | 2.94431 | 13.0138502 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 229 | 8.77e-70 | NR | HMV57842.1 | 70125 | g5312 | i0 | 72.1 | 0.997737556561086 | 147 | 41 | 99.8 | 0 | 441 | 1 | 103 | 249 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 441 | 229 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26934169 | 26934169 | PRJNA488043_P_NODE_21122_length_161_cov_2.515152_g18880_i0 | PRJNA488043 | 21122 | 161 | 2.515152 | 4.04939472 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.5 | 6.62e-9 | NR | HMV57851.1 | 70125 | g18880 | i0 | 51.9 | 1.93788819875776 | 52 | 25 | 96.9 | 0 | 158 | 3 | 118 | 169 | HMV57851.1 DUF1834 family protein [Nitrospira sp.] | diamond | 312 | 60.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27424213 | 27424213 | PRJNA488043_P_NODE_18803_length_184_cov_1.709677_g16561_i0 | PRJNA488043 | 18803 | 184 | 1.709677 | 3.14580568 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 125 | 1.6599999999999998e-31 | NR | MBK8380046.1 | 70125 | g16561 | i0 | 100 | 0.978260869565217 | 60 | 0 | 97.8 | 0 | 182 | 3 | 650 | 709 | MBK8380046.1 hypothetical protein [Nitrospira sp.] | diamond | 180 | 125 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27550166 | 27550166 | PRJNA488043_P_NODE_6144_length_516_cov_4.351129_g4116_i0 | PRJNA488043 | 6144 | 516 | 4.351129 | 22.45182564 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 107 | 1.8399999999999998e-23 | NR | HMV57842.1 | 70125 | g4116 | i0 | 63.9 | 0.418604651162791 | 72 | 26 | 41.9 | 0 | 296 | 511 | 7 | 78 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 216 | 107 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27834348 | 27834348 | PRJNA488043_P_NODE_10784_length_315_cov_2.241259_g8543_i0 | PRJNA488043 | 10784 | 315 | 2.241259 | 7.05996585 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 63.2 | 4.6e-9 | NR | HMV57846.1 | 70125 | g8543 | i0 | 37.1 | 0.923809523809524 | 97 | 59 | 92.4 | 1 | 4 | 294 | 174 | 268 | HMV57846.1 hypothetical protein [Nitrospira sp.] | diamond | 291 | 63.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 28150332 | 28150332 | PRJNA488043_P_NODE_13145_length_258_cov_2.716157_g10904_i0 | PRJNA488043 | 13145 | 258 | 2.716157 | 7.00768506 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 88.2 | 2.63e-20 | NR | HMV57844.1 | 70125 | g10904 | i0 | 69.4 | 0.720930232558139 | 62 | 19 | 72.1 | 0 | 3 | 188 | 52 | 113 | HMV57844.1 hypothetical protein [Nitrospira sp.] | diamond | 186 | 88.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30013257 | 30013257 | PRJNA488043_P_NODE_1011_length_1800_cov_2.656691_g352_i0 | PRJNA488043 | 1011 | 1800 | 2.656691 | 47.820438 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 314 | 2.9399999999999986e-96 | NR | HMV57842.1 | 70125 | g352 | i0 | 79 | 0.31 | 186 | 37 | 30.7 | 1 | 1 | 552 | 331 | 516 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 558 | 314 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30060625 | 30060625 | PRJNA488043_P_NODE_14631_length_233_cov_2.441176_g12389_i0 | PRJNA488043 | 14631 | 233 | 2.441176 | 5.68794008 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 63.9 | 2.09e-10 | NR | HND02873.1 | 70125 | g12389 | i0 | 43.7 | 1.89270386266094 | 71 | 40 | 91.4 | 0 | 231 | 19 | 94 | 164 | HND02873.1 hypothetical protein [Nitrospira sp.] | diamond | 441 | 63.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30297989 | 30297989 | PRJNA488043_P_NODE_4172_length_681_cov_3.142638_g2423_i0 | PRJNA488043 | 4172 | 681 | 3.142638 | 21.40136478 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 82 | 4.82e-15 | NR | HNN43760.1 | 70125 | g2423 | i0 | 41 | 0.92511013215859 | 105 | 60 | 46.3 | 1 | 384 | 70 | 27 | 129 | HNN43760.1 replication protein P [Nitrospira sp.] | diamond | 630 | 82 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31276890 | 31276890 | PRJNA488043_P_NODE_10255_length_332_cov_2.155116_g8014_i0 | PRJNA488043 | 10255 | 332 | 2.155116 | 7.15498512 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 62.4 | 1.03e-8 | NR | HMV57846.1 | 70125 | g8014 | i0 | 37.1 | 0.876506024096386 | 97 | 59 | 87.7 | 1 | 4 | 294 | 174 | 268 | HMV57846.1 hypothetical protein [Nitrospira sp.] | diamond | 291 | 62.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31846274 | 31846274 | PRJNA488043_P_NODE_8237_length_404_cov_2.157333_g6039_i0 | PRJNA488043 | 8237 | 404 | 2.157333 | 8.71562532 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 241 | 1.2299999999999999e-74 | NR | HMV57842.1 | 70125 | g6039 | i0 | 82.8 | 0.995049504950495 | 134 | 23 | 99.5 | 0 | 404 | 3 | 331 | 464 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 402 | 241 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32321300 | 32321300 | PRJNA488043_P_NODE_7299_length_450_cov_2.263658_g5158_i0 | PRJNA488043 | 7299 | 450 | 2.263658 | 10.186461 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 281 | 6.18e-90 | NR | HMV57842.1 | 70125 | g5158 | i0 | 81.9 | 0.993333333333333 | 149 | 27 | 99.3 | 0 | 447 | 1 | 271 | 419 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 447 | 281 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32731585 | 32731585 | PRJNA488043_P_NODE_16520_length_208_cov_1.608939_g14278_i0 | PRJNA488043 | 16520 | 208 | 1.608939 | 3.34659312 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 75.5 | 1.76e-15 | NR | MBK7421579.1 | 70125 | g14278 | i0 | 100 | 0.548076923076923 | 38 | 0 | 54.8 | 0 | 207 | 94 | 91 | 128 | MBK7421579.1 hypothetical protein [Nitrospira sp.] | diamond | 114 | 75.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32857414 | 32857414 | PRJNA488043_P_NODE_1020_length_1774_cov_2.721490_g352_i1 | PRJNA488043 | 1020 | 1774 | 2.72149 | 48.2792326 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 314 | 2.279999999999999e-96 | NR | HMV57842.1 | 70125 | g352 | i1 | 79 | 0.788049605411499 | 186 | 37 | 31.1 | 1 | 1 | 552 | 331 | 516 | HMV57842.1 hypothetical protein [Nitrospira sp.] | diamond | 1398 | 314 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;