contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA488043" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29444494 | 29444494 | PRJNA488043_P_NODE_22630_length_150_cov_1.371901_g20388_i0 | PRJNA488043 | 22630 | 150 | 1.371901 | 2.0578515 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 62 | 1.62e-9 | NR | HEX4935314.1 | 2026741 | g20388 | i0 | 59.6 | 0.94 | 47 | 18 | 94 | 1 | 8 | 148 | 89 | 134 | HEX4935314.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 141 | 62 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29791871 | 29791871 | PRJNA488043_P_NODE_20411_length_168_cov_1.007194_g18169_i0 | PRJNA488043 | 20411 | 168 | 1.007194 | 1.69208592 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.1 | 0.00833 | NR | HXG72580.1 | 2026741 | g18169 | i0 | 55.8 | 1.85714285714286 | 52 | 20 | 92.9 | 2 | 5 | 160 | 130 | 178 | HXG72580.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 312 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30771612 | 30771612 | PRJNA488043_P_NODE_7974_length_416_cov_2.687339_g5787_i0 | PRJNA488043 | 7974 | 416 | 2.687339 | 11.17933024 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 64.3 | 1.07e-9 | NR | MBK7786953.1 | 2026742 | g5787 | i0 | 41.2 | 0.612980769230769 | 85 | 40 | 60.6 | 2 | 301 | 50 | 97 | 172 | MBK7786953.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 255 | 64.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31308593 | 31308593 | PRJNA488043_P_NODE_16235_length_211_cov_2.038462_g13993_i0 | PRJNA488043 | 16235 | 211 | 2.038462 | 4.30115482 | Gemmatimonas sp. SG8_38_2 | 1703358 | Bacteria | Bacteria | 117 | 8.880000000000001e-29 | NR | KPK66790.1 | 1703358 | g13993 | i0 | 75.4 | 0.981042654028436 | 69 | 17 | 98.1 | 0 | 211 | 5 | 586 | 654 | KPK66790.1 MAG: hypothetical protein AMS21_01150 [Gemmatimonas sp. SG8_38_2] | diamond | 207 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. SG8_38_2 | |
| 31957259 | 31957259 | PRJNA488043_P_NODE_17797_length_194_cov_1.806061_g15555_i0 | PRJNA488043 | 17797 | 194 | 1.806061 | 3.50375834 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.1 | 3.97e-5 | NR | HVH40041.1 | 2026741 | g15555 | i0 | 41.7 | 2.8298969072165 | 60 | 35 | 92.8 | 0 | 192 | 13 | 143 | 202 | HVH40041.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 549 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;