RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA488043" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA488043 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27550160 27550160 PRJNA488043_P_NODE_19264_length_179_cov_2.293333_g17022_i0 PRJNA488043 19264 179 2.293333 4.10506607 Periconia macrospinosa 97972 Fungi Fungi 42.4 0.0218   NR PVI07971.1 97972 g17022 i0 39.2 0.854748603351955 51 31 85.5 0 155 3 229 279 PVI07971.1 FolC bifunctional protein [Periconia macrospinosa] diamond 153 42.4 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia macrospinosa
27865866 27865866 PRJNA488043_P_NODE_15825_length_216_cov_2.058824_g13583_i0 PRJNA488043 15825 216 2.058824 4.44705984 Lithohypha guttulata 1690604 Fungi Fungi 42 0.0496   NR KAK5079622.1 1690604 g13583 i0 34 0.736111111111111 53 34 73.6 1 211 53 1006 1057 KAK5079622.1 hypothetical protein LTR24_009087 [Lithohypha guttulata] diamond 159 42 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;