RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA485080" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA485080 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9377091 9377091 PRJNA485080_P_NODE_34628_length_245_cov_0.895349_g34534_i0 PRJNA485080 34628 245 0.895349 2.19360505 Metazoa 33208 Cnidaria other_Eukaryota 145 2.17e-38   NR XP_031557378.1 6105 g34534 i0 91 641.25306122449 78 7 95.5 0 1 234 1762 1839 XP_031557378.1 helicase domino-like isoform X4 [Actinia tenebrosa] diamond 157107 146 0.993150684931507 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
30455797 30455797 PRJNA485080_P_NODE_18113_length_272_cov_1.402010_g18019_i0 PRJNA485080 18113 272 1.40201 3.8134672 Porites evermanni 104178 Cnidaria other_Eukaryota 44.7 0.00532   NR CAH3186817.1 104178 g18019 i0 30.6 0.794117647058823 72 38 79.4 3 11 226 92 151 CAH3186817.1 unnamed protein product [Porites evermanni] diamond 216 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;