RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA485080" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA485080 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23401454 23401454 PRJNA485080_P_NODE_29919_length_247_cov_0.885057_g29825_i0 PRJNA485080 29919 247 0.885057 2.18609079 Exidia glandulosa HHB12 5219 Fungi Fungi 117 2.79e-29   NR KZW00022.1 1314781 g29825 i0 78 0.995951417004049 82 15 96 1 238 2 181 262 KZW00022.1 hypothetical protein EXIGLDRAFT_190473 [Exidia glandulosa HHB12029] diamond 246 117 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Auriculariales Exidiaceae Exidia Exidia glandulosa
30581616 30581616 PRJNA485080_P_NODE_29533_length_248_cov_0.880000_g29439_i0 PRJNA485080 29533 248 0.88 2.1824 Mycena polygramma 230801 Fungi Fungi 43.5 0.0208   NR KAJ7682286.1 230801 g29439 i0 48.1 0.653225806451613 54 22 58.1 2 74 217 227 280 KAJ7682286.1 hypothetical protein DFH06DRAFT_1464056 [Mycena polygramma] diamond 162 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena polygramma
32542654 32542654 PRJNA485080_P_NODE_17919_length_273_cov_1.480000_g17825_i0 PRJNA485080 17919 273 1.48 4.0404 Mycena kentingensis (nom. inval.) 1325293 Fungi Fungi 44.7 0.0112   NR KAF7319883.1 1325293 g17825 i0 35.1 2.16483516483516 77 43 79.1 3 262 47 583 657 KAF7319883.1 hypothetical protein MKEN_00771500 [Mycena kentingensis (nom. inval.)] diamond 591 44.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena kentingensis (nom. inval.)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;