contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA484127" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5552292 | 5552292 | PRJNA484127_P_NODE_36145_length_245_cov_0.906977_g35996_i0 | PRJNA484127 | 36145 | 245 | 0.906977 | 2.22209365 | Adlercreutzia | 447020 | Bacteria | Bacteria | 116 | 8.23e-30 | NR | MDO4291543.1 | 1972561 | g35996 | i0 | 74.1 | 2.96326530612245 | 81 | 21 | 99.2 | 0 | 3 | 245 | 187 | 267 | MDO4291543.1 ModD protein [Eggerthellaceae bacterium] | diamond | 726 | 117 | 0.991452991452991 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | Eggerthellales | Eggerthellaceae | Eggerthellaceae bacterium | |||
| 18300403 | 18300403 | PRJNA484127_P_NODE_7995_length_418_cov_1.127536_g7846_i0 | PRJNA484127 | 7995 | 418 | 1.127536 | 4.71310048 | Bacteria | 2 | Bacteria | Bacteria | 236 | 2.5e-73 | NR | HVN50138.1 | 2201156 | g7846 | i0 | 80.6 | 50.7846889952153 | 139 | 27 | 99.8 | 0 | 417 | 1 | 202 | 340 | HVN50138.1 adenosylhomocysteinase [Acidimicrobiales bacterium] | diamond | 21228 | 236 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 19574519 | 19574519 | PRJNA484127_P_NODE_38796_length_242_cov_0.923077_g38647_i0 | PRJNA484127 | 38796 | 242 | 0.923077 | 2.23384634 | Paratractidigestivibacter faecalis | 2292441 | Bacteria | Bacteria | 147 | 2.73e-43 | NR | WP_117205903.1 | 2292441 | g38647 | i0 | 100 | 0.90495867768595 | 73 | 0 | 90.5 | 0 | 221 | 3 | 1 | 73 | WP_117205903.1 ribose 5-phosphate isomerase B [Paratractidigestivibacter faecalis] | diamond | 219 | 147 | 1 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | Coriobacteriales | Atopobiaceae | Paratractidigestivibacter | Paratractidigestivibacter faecalis | ||
| 23400680 | 23400680 | PRJNA484127_P_NODE_18479_length_304_cov_1.307359_g18330_i0 | PRJNA484127 | 18479 | 304 | 1.307359 | 3.97437136 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 126 | 7.309999999999999e-32 | NR | MCL4368605.1 | 2900548 | g18330 | i0 | 60.6 | 11.7434210526316 | 94 | 37 | 92.8 | 0 | 300 | 19 | 220 | 313 | MCL4368605.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Actinomycetota bacterium] | diamond | 3570 | 126 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 25323569 | 25323569 | PRJNA484127_P_NODE_32660_length_249_cov_0.886364_g32511_i0 | PRJNA484127 | 32660 | 249 | 0.886364 | 2.20704636 | Microbacterium | 33882 | Bacteria | Bacteria | 152 | 2.2099999999999993e-43 | NR | WP_231478652.1 | 33882 | g32511 | i0 | 97.6 | 0.987951807228916 | 82 | 2 | 98.8 | 0 | 248 | 3 | 20 | 101 | WP_231478652.1 MULTISPECIES: sensor histidine kinase [Microbacterium] | diamond | 246 | 152 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | |||
| 26696343 | 26696343 | PRJNA484127_P_NODE_25861_length_267_cov_1.247423_g25712_i0 | PRJNA484127 | 25861 | 267 | 1.247423 | 3.33061941 | Ilumatobacteraceae bacterium | 2497619 | Bacteria | Bacteria | 43.5 | 0.0256 | NR | MEX0846683.1 | 2497619 | g25712 | i0 | 25.9 | 0.955056179775281 | 85 | 63 | 95.5 | 0 | 9 | 263 | 296 | 380 | MEX0846683.1 HAMP domain-containing sensor histidine kinase [Ilumatobacteraceae bacterium] | diamond | 255 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacteraceae bacterium | |||
| 27424161 | 27424161 | PRJNA484127_P_NODE_12723_length_349_cov_1.507246_g12574_i0 | PRJNA484127 | 12723 | 349 | 1.507246 | 5.26028854 | Frankia sp. Cj3 | 2880976 | Bacteria | Bacteria | 42 | 0.0467 | NR | WP_370651596.1 | 2880976 | g12574 | i0 | 39.3 | 0.481375358166189 | 56 | 33 | 47.3 | 1 | 335 | 171 | 17 | 72 | WP_370651596.1 helix-turn-helix domain-containing protein [Frankia sp. Cj3] | diamond | 168 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Frankiales | Frankiaceae | Frankia | Frankia sp. Cj3 | ||
| 27771429 | 27771429 | PRJNA484127_P_NODE_11844_length_359_cov_1.048951_g11695_i0 | PRJNA484127 | 11844 | 359 | 1.048951 | 3.76573409 | Streptomyces sp. CHB9.2 | 2841670 | Bacteria | Bacteria | 219 | 4.18e-65 | NR | WP_252941089.1 | 2841670 | g11695 | i0 | 88.2 | 0.994428969359331 | 119 | 14 | 99.4 | 0 | 3 | 359 | 543 | 661 | WP_252941089.1 hypothetical protein [Streptomyces sp. CHB9.2] | diamond | 357 | 219 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. CHB9.2 | ||
| 29286684 | 29286684 | PRJNA484127_P_NODE_32509_length_249_cov_1.625000_g32360_i0 | PRJNA484127 | 32509 | 249 | 1.625 | 4.04625 | Actinomycetales bacterium | 1911520 | Bacteria | Bacteria | 45.4 | 0.00441 | NR | MBU6147104.1 | 1911520 | g32360 | i0 | 40 | 0.783132530120482 | 65 | 35 | 74.7 | 2 | 53 | 238 | 118 | 181 | MBU6147104.1 hypothetical protein [Actinomycetales bacterium] | diamond | 195 | 45.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetales bacterium | ||||
| 30345685 | 30345685 | PRJNA484127_P_NODE_15952_length_321_cov_0.870968_g15803_i0 | PRJNA484127 | 15952 | 321 | 0.870968 | 2.79580728 | Actinomycetota | 201174 | Bacteria | Bacteria | 131 | 8.9e-37 | NR | MEI6362425.1 | 1883427 | g15803 | i0 | 68.8 | 3.45794392523365 | 93 | 28 | 86.9 | 1 | 1 | 279 | 52 | 143 | MEI6362425.1 RbsD/FucU domain-containing protein [Actinomycetes bacterium] | diamond | 1110 | 132 | 0.992424242424242 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium | |||||
| 30914025 | 30914025 | PRJNA484127_P_NODE_11174_length_366_cov_2.129693_g11025_i0 | PRJNA484127 | 11174 | 366 | 2.129693 | 7.79467638 | Actinomycetes | 1760 | Bacteria | Bacteria | 64.3 | 4.16e-9 | NR | WP_005458622.1 | 40989 | g11025 | i0 | 41.8 | 6.76229508196721 | 91 | 50 | 73 | 3 | 345 | 79 | 373 | 462 | WP_005458622.1 AMP-dependent synthetase/ligase [Saccharomonospora cyanea] | diamond | 2475 | 64.7 | 0.993817619783617 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Saccharomonospora | Saccharomonospora cyanea | ||
| 32067696 | 32067696 | PRJNA484127_P_NODE_34278_length_247_cov_1.264368_g34129_i0 | PRJNA484127 | 34278 | 247 | 1.264368 | 3.12298896 | Gaiellaceae bacterium | 2838783 | Bacteria | Bacteria | 46.6 | 0.0017 | NR | HEY3183604.1 | 2838783 | g34129 | i0 | 42.3 | 0.862348178137652 | 71 | 21 | 86.2 | 3 | 23 | 235 | 22 | 72 | HEY3183604.1 hypothetical protein [Gaiellaceae bacterium] | diamond | 213 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Gaiellales | Gaiellaceae | Gaiellaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;