RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA484127" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA484127 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27834316 27834316 PRJNA484127_P_NODE_38884_length_242_cov_0.923077_g38735_i0 PRJNA484127 38884 242 0.923077 2.23384634 Caudoviricetes sp. 2832643 Viruses Viruses 61.2 2.06e-10   NR QHJ79471.1 2832643 g38735 i0 52.5 0.756198347107438 61 29 75.6 0 27 209 1 61 QHJ79471.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 183 61.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29334478 29334478 PRJNA484127_P_NODE_37969_length_243_cov_0.917647_g37820_i0 PRJNA484127 37969 243 0.917647 2.22988221 Ripduovirus 2560215 Viruses Viruses 92.4 1.2e-19   NR YP_009598718.1 1923889 g37820 i0 50.6 1.96296296296296 81 39 100 1 1 243 171 250 YP_009598718.1 virion structural protein [Ralstonia phage RP12] diamond 477 92.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Chimalliviridae Ripduovirus Ripduovirus RP12
32857387 32857387 PRJNA484127_P_NODE_37780_length_243_cov_0.917647_g37631_i0 PRJNA484127 37780 243 0.917647 2.22988221 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 2.33e-6   NR DAK55183.1 2832643 g37631 i0 47.6 0.777777777777778 63 32 77.8 1 241 53 824 885 DAK55183.1 MAG TPA: crystallin beta/gamma motif-containing protein [Caudoviricetes sp.] diamond 189 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;