contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA484127" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26601155 | 26601155 | PRJNA484127_P_NODE_10881_length_370_cov_2.572391_g10732_i0 | PRJNA484127 | 10881 | 370 | 2.572391 | 9.5178467 | Helicosporidium sp. ATCC 5 | 1907511 | Plants | Plants | 151 | 8.59e-44 | NR | KDD76381.1 | 1291522 | g10732 | i0 | 65.4 | 1.71081081081081 | 104 | 36 | 84.3 | 0 | 2 | 313 | 74 | 177 | KDD76381.1 hypothetical protein H632_c248p2 [Helicosporidium sp. ATCC 50920] | diamond | 633 | 151 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Helicosporidium | Helicosporidium sp. ATCC 50920 | |
| 30408646 | 30408646 | PRJNA484127_P_NODE_40473_length_227_cov_2.025974_g40324_i0 | PRJNA484127 | 40473 | 227 | 2.025974 | 4.59896098 | Eukaryota | 2759 | Plants | Plants | 70.5 | 4.74e-13 | NR | KAK9804915.1 | 41462 | g40324 | i0 | 64.2 | 2.8942731277533 | 53 | 19 | 70 | 0 | 2 | 160 | 101 | 153 | KAK9804915.1 hypothetical protein WJX72_011827 [[Myrmecia] bisecta] | diamond | 657 | 70.9 | 0.994358251057828 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | [Myrmecia] bisecta | |
| 30914027 | 30914027 | PRJNA484127_P_NODE_30434_length_252_cov_0.871508_g30285_i0 | PRJNA484127 | 30434 | 252 | 0.871508 | 2.19620016 | root | 1 | Root_unresolved | Root_unresolved | 50.4 | 7.67e-5 | NR | KAF5830871.1 | 3046 | g30285 | i0 | 38.6 | 10.4761904761905 | 70 | 41 | 83.3 | 1 | 243 | 34 | 92 | 159 | KAF5830871.1 hypothetical protein DUNSADRAFT_13931 [Dunaliella salina] | diamond | 2640 | 50.8 | 0.992125984251969 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Dunaliellaceae | Dunaliella | Dunaliella salina | |
| 31261482 | 31261482 | PRJNA484127_P_NODE_25795_length_267_cov_1.567010_g25646_i0 | PRJNA484127 | 25795 | 267 | 1.56701 | 4.1839167 | Chlorellaceae | 35461 | Plants | Plants | 91.7 | 3.09e-19 | NR | KAK2078008.1 | 3111 | g25646 | i0 | 54 | 4.8876404494382 | 87 | 37 | 97.8 | 1 | 267 | 7 | 123 | 206 | KAK2078008.1 T-complex protein 1 subunit eta [Prototheca wickerhamii] | diamond | 1305 | 92 | 0.996739130434783 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Prototheca | Prototheca wickerhamii | |
| 31276847 | 31276847 | PRJNA484127_P_NODE_21795_length_285_cov_1.669811_g21646_i0 | PRJNA484127 | 21795 | 285 | 1.669811 | 4.75896135 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 45.1 | 0.00938 | NR | XP_011400040.1 | 3075 | g21646 | i0 | 45.3 | 1.11578947368421 | 53 | 28 | 55.8 | 1 | 119 | 277 | 16 | 67 | XP_011400040.1 Phospholipase B-like 1 [Auxenochlorella protothecoides] | diamond | 318 | 45.1 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;