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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA484127" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA484127 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1723028 1723028 PRJNA484127_P_NODE_13642_length_340_cov_1.164794_g13493_i0 PRJNA484127 13642 340 1.164794 3.9602996 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 108 1.71e-25   NR CDW80281.1 5949 g13493 i0 48.1 7.47352941176471 106 54 93.5 1 3 320 226 330 CDW80281.1 UNKNOWN [Stylonychia lemnae] diamond 2541 109 0.990825688073395 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
17025988 17025988 PRJNA484127_P_NODE_38314_length_242_cov_2.579882_g38165_i0 PRJNA484127 38314 242 2.579882 6.24331444 root 1 Root_unresolved Root_unresolved 122 1.93e-30   NR XP_067925722.1 483139 g38165 i0 77.5 10.6487603305785 71 16 88 0 215 3 102 172 XP_067925722.1 isocitrate dehydrogenase [Cystoisospora suis] diamond 2577 123 0.991869918699187 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
26839476 26839476 PRJNA484127_P_NODE_11741_length_360_cov_1.358885_g11592_i0 PRJNA484127 11741 360 1.358885 4.891986 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 66.6 2.76e-10   NR KAJ8578052.1 4785 g11592 i0 53.3 1.325 60 28 50 0 3 182 177 236 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 477 66.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27455693 27455693 PRJNA484127_P_NODE_18183_length_305_cov_2.379310_g18034_i0 PRJNA484127 18183 305 2.37931 7.2568955 Blastocystis sp. subtype 4 944170 SAR_Eukaryotes SAR_Eukaryotes 61.6 1.75e-8   NR XP_014527687.1 944170 g18034 i0 50.9 0.99344262295082 55 27 54.1 0 212 48 155 209 XP_014527687.1 high mobility group b protein 6-like protein [Blastocystis sp. subtype 4] diamond 303 61.6 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis sp. subtype 4
27598068 27598068 PRJNA484127_P_NODE_7504_length_429_cov_1.095506_g7356_i0 PRJNA484127 7504 429 1.095506 4.69972074 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 123 6.78e-31   NR KAL3788302.1 29204 g7356 i0 49.3 4.99300699300699 142 66 99.3 3 427 2 166 301 KAL3788302.1 hypothetical protein HJC23_002876 [Cyclotella cryptica] diamond 2142 123 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
27629634 27629634 PRJNA484127_P_NODE_34104_length_247_cov_1.793103_g33955_i0 PRJNA484127 34104 247 1.793103 4.42896441 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 91.3 1.26e-20   NR XP_002259675.1 5851 g33955 i0 53.7 34.8097165991903 82 37 99.6 1 246 1 19 99 XP_002259675.1 ras-related protein Rab-1A, putative [Plasmodium knowlesi strain H] diamond 8598 91.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
28055291 28055291 PRJNA484127_P_NODE_7165_length_437_cov_1.211538_g7017_i0 PRJNA484127 7165 437 1.211538 5.29442106 Blastocystis sp. Blastoise 3128533 SAR_Eukaryotes SAR_Eukaryotes 130 1.09e-34   NR KAK8790990.1 3128533 g7017 i0 51.2 0.88558352402746 129 63 88.6 0 392 6 81 209 KAK8790990.1 hypothetical protein WA158_005621 [Blastocystis sp. Blastoise] diamond 387 130 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis sp. Blastoise
28292379 28292379 PRJNA484127_P_NODE_16306_length_318_cov_1.273469_g16157_i0 PRJNA484127 16306 318 1.273469 4.04963142 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 3.38e-34   NR TMW63526.1 41045 g16157 i0 61.9 12.7830188679245 105 40 99.1 0 2 316 302 406 TMW63526.1 hypothetical protein Poli38472_002467 [Pythium oligandrum] diamond 4065 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29065923 29065923 PRJNA484127_P_NODE_21468_length_287_cov_1.355140_g21319_i0 PRJNA484127 21468 287 1.35514 3.8892518 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.17e-15   NR CEO98730.1 37360 g21319 i0 50 0.878048780487805 84 38 87.8 2 35 286 1 80 CEO98730.1 hypothetical protein PBRA_006844 [Plasmodiophora brassicae] diamond 252 78.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29065934 29065934 PRJNA484127_P_NODE_36868_length_244_cov_0.912281_g36719_i0 PRJNA484127 36868 244 0.912281 2.22596564 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 52 2.15e-5   NR OQR97629.1 1202772 g36719 i0 61.1 0.442622950819672 36 14 44.3 0 122 229 272 307 OQR97629.1 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Achlya hypogyna] diamond 108 52 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29113548 29113548 PRJNA484127_P_NODE_30528_length_252_cov_0.871508_g30379_i0 PRJNA484127 30528 252 0.871508 2.19620016 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 127 1.5499999999999998e-35   NR XP_013228494.1 5802 g30379 i0 77.8 3.85714285714286 81 18 96.4 0 245 3 1 81 XP_013228494.1 40S ribosomal protein S18, putative [Eimeria tenella] diamond 972 128 0.9921875 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
29192202 29192202 PRJNA484127_P_NODE_25529_length_268_cov_1.600000_g25380_i0 PRJNA484127 25529 268 1.6 4.288 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 95.5 1.23e-20   NR SPQ93309.1 37360 g25380 i0 64.2 0.75 67 24 75 0 3 203 460 526 SPQ93309.1 unnamed protein product [Plasmodiophora brassicae] diamond 201 95.5 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29254986 29254986 PRJNA484127_P_NODE_28849_length_255_cov_4.313187_g28700_i0 PRJNA484127 28849 255 4.313187 10.99862685 Symbiodinium natans 878477 SAR_Eukaryotes SAR_Eukaryotes 51.6 3.09e-5   NR CAE7481866.1 878477 g28700 i0 54.2 0.564705882352941 48 22 56.5 0 239 96 51 98 CAE7481866.1 unnamed protein product [Symbiodinium natans] diamond 144 51.6 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium natans
29318299 29318299 PRJNA484127_P_NODE_23229_length_278_cov_1.687805_g23080_i0 PRJNA484127 23229 278 1.687805 4.6920979 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 89.7 1.1e-18   NR CEL92077.1 1169540 g23080 i0 58.2 1.65107913669065 79 30 82 2 49 276 248 326 CEL92077.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 459 89.7 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
29966071 29966071 PRJNA484127_P_NODE_29751_length_253_cov_0.866667_g29602_i0 PRJNA484127 29751 253 0.866667 2.19266751 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.6 5.47e-7   NR KAF0694440.1 120398 g29602 i0 37.5 3.699604743083 80 48 94.9 1 250 11 304 381 KAF0694440.1 hypothetical protein As57867_014640 [Aphanomyces stellatus] diamond 936 57 0.992982456140351 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
30139094 30139094 PRJNA484127_P_NODE_3972_length_561_cov_1.739754_g3827_i0 PRJNA484127 3972 561 1.739754 9.76001994 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.9 5.29e-11   NR MES1907185.1 1215613 g3827 i0 64 0.572192513368984 50 18 26.7 0 54 203 1 50 MES1907185.1 hypothetical protein [Cercozoa sp. M6MM] diamond 321 70.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30992632 30992632 PRJNA484127_P_NODE_29394_length_253_cov_3.577778_g29245_i0 PRJNA484127 29394 253 3.577778 9.05177834 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 68.2 3e-12   NR CCA27654.1 890382 g29245 i0 57.9 2.62055335968379 57 20 62.8 1 161 3 69 125 CCA27654.1 hypothetical protein ALNC14_137980 [Albugo laibachii Nc14] diamond 663 68.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
31356485 31356485 PRJNA484127_P_NODE_34476_length_247_cov_0.896552_g34327_i0 PRJNA484127 34476 247 0.896552 2.21448344 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 94.4 6.65e-21   NR XP_012650249.1 1133968 g34327 i0 59.5 2.72064777327935 74 23 81.4 1 242 42 248 321 XP_012650249.1 guanine nucleotide-binding protein subunit beta-2-like 1 protein [Babesia microti strain RI] diamond 672 94.7 0.996832101372756 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
31388140 31388140 PRJNA484127_P_NODE_35696_length_246_cov_0.901734_g35547_i0 PRJNA484127 35696 246 0.901734 2.21826564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 67.4 7.94e-11   NR CEM33325.1 1169540 g35547 i0 48.8 3.89024390243902 80 39 95.1 1 245 12 619 698 CEM33325.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 957 67.4 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
32415998 32415998 PRJNA484127_P_NODE_34339_length_247_cov_0.896552_g34190_i0 PRJNA484127 34339 247 0.896552 2.21448344 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 64.7 7.52e-10   NR CAI2383647.1 5936 g34190 i0 47.4 0.947368421052632 78 34 86.2 1 246 34 5696 5773 CAI2383647.1 unnamed protein product [Moneuplotes crassus] diamond 234 64.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;