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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA482207" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA482207 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26759638 26759638 PRJNA482207_P_NODE_24361_length_247_cov_0.885057_g24251_i0 PRJNA482207 24361 247 0.885057 2.18609079 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 65.1 5.2e-10   NR RLN92298.1 2483409 g24251 i0 52.2 1.62753036437247 67 32 81.4 0 2 202 273 339 RLN92298.1 hypothetical protein BBJ28_00011459 [Nothophytophthora sp. Chile5] diamond 402 65.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
26918100 26918100 PRJNA482207_P_NODE_11662_length_312_cov_1.255230_g11552_i0 PRJNA482207 11662 312 1.25523 3.9163176 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 87.4 1.72e-17   NR KAF1322475.1 82926 g11552 i0 40.2 4.66346153846154 97 58 93.3 0 311 21 563 659 KAF1322475.1 Retrovirus polyprotein, partial [Globisporangium splendens] diamond 1455 87.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
26981299 26981299 PRJNA482207_P_NODE_12942_length_301_cov_1.013158_g12832_i0 PRJNA482207 12942 301 1.013158 3.04960558 Phytophthora rubi 129364 SAR_Eukaryotes SAR_Eukaryotes 62.8 3.37e-9   NR KAE9297319.1 129364 g12832 i0 40.8 1.50498338870432 76 45 75.7 0 234 7 141 216 KAE9297319.1 hypothetical protein PR003_g23526 [Phytophthora rubi] diamond 453 62.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora rubi
26997299 26997299 PRJNA482207_P_NODE_4282_length_463_cov_0.802564_g4172_i0 PRJNA482207 4282 463 0.802564 3.71587132 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 145 7.269999999999999e-37   NR KAF0729186.1 100861 g4172 i0 47.7 5.79913606911447 149 77 95.9 1 447 4 779 927 KAF0729186.1 hypothetical protein Ae201684_013163 [Aphanomyces euteiches] diamond 2685 145 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27107684 27107684 PRJNA482207_P_NODE_10062_length_329_cov_1.203125_g9952_i0 PRJNA482207 10062 329 1.203125 3.95828125 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 80.1 6.08e-16   NR KAG9404967.1 112091 g9952 i0 60.7 0.556231003039514 61 24 55.6 0 144 326 132 192 KAG9404967.1 hypothetical protein AC1031_004065 [Aphanomyces cochlioides] diamond 183 80.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
27170896 27170896 PRJNA482207_P_NODE_11182_length_317_cov_0.946721_g11072_i0 PRJNA482207 11182 317 0.946721 3.00110557 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 56.2 1.7e-6   NR XP_008608261.1 1156394 g11072 i0 60 0.889589905362776 50 20 47.3 0 151 2 164 213 XP_008608261.1 hypothetical protein SDRG_04365 [Saprolegnia diclina VS20] diamond 282 56.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
27345426 27345426 PRJNA482207_P_NODE_21063_length_250_cov_0.870056_g20953_i0 PRJNA482207 21063 250 0.870056 2.17514 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 91.3 4.26e-21   NR XP_067792542.1 4785 g20953 i0 47 8.772 83 44 99.6 0 1 249 71 153 XP_067792542.1 uncharacterized protein IUM83_17047 [Phytophthora cinnamomi] diamond 2193 92 0.992391304347826 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27360942 27360942 PRJNA482207_P_NODE_17963_length_261_cov_1.090426_g17853_i0 PRJNA482207 17963 261 1.090426 2.84601186 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 53.5 2.59e-6   NR KAG3206229.1 29920 g17853 i0 44.4 2.03448275862069 54 27 62.1 1 59 220 71 121 KAG3206229.1 hypothetical protein PC128_g972 [Phytophthora cactorum] diamond 531 53.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
27408697 27408697 PRJNA482207_P_NODE_22883_length_248_cov_0.880000_g22773_i0 PRJNA482207 22883 248 0.88 2.1824 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.88e-4   NR RHY12290.1 112090 g22773 i0 40.3 4.31854838709677 62 30 66.5 1 235 71 198 259 RHY12290.1 hypothetical protein DYB25_003020 [Aphanomyces astaci] diamond 1071 49.7 0.991951710261569 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27487077 27487077 PRJNA482207_P_NODE_24823_length_246_cov_0.890173_g24713_i0 PRJNA482207 24823 246 0.890173 2.18982558 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 80.1 1.67e-15   NR KAH9110766.1 100861 g24713 i0 44.4 2.96341463414634 81 45 98.8 0 244 2 112 192 KAH9110766.1 hypothetical protein LEN26_013643 [Aphanomyces euteiches] diamond 729 80.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27676767 27676767 PRJNA482207_P_NODE_15044_length_283_cov_1.390476_g14934_i0 PRJNA482207 15044 283 1.390476 3.93504708 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 51.2 5.18e-5   NR RLN05777.1 2483409 g14934 i0 40 1.27208480565371 60 36 63.6 0 98 277 54 113 RLN05777.1 hypothetical protein BBJ28_00019071 [Nothophytophthora sp. Chile5] diamond 360 51.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
27676769 27676769 PRJNA482207_P_NODE_19604_length_251_cov_0.865169_g19494_i0 PRJNA482207 19604 251 0.865169 2.17157419 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 47 0.00127   NR KAJ8537474.1 4785 g19494 i0 36.9 1.54183266932271 65 39 77.7 1 251 57 112 174 KAJ8537474.1 hypothetical protein ON010_g13123 [Phytophthora cinnamomi] diamond 387 47 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27819085 27819085 PRJNA482207_P_NODE_4544_length_451_cov_0.732804_g4434_i0 PRJNA482207 4544 451 0.732804 3.30494604 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 52 1.87e-4   NR OWZ01914.1 4795 g4434 i0 31.1 1.01773835920177 90 62 59.9 0 284 15 465 554 OWZ01914.1 LOW QUALITY PROTEIN: hypothetical protein PHMEG_00026622, partial [Phytophthora megakarya] diamond 459 52.4 0.99236641221374 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
28339575 28339575 PRJNA482207_P_NODE_12006_length_309_cov_1.266949_g11896_i0 PRJNA482207 12006 309 1.266949 3.91487241 Phytophthora palmivora 4796 SAR_Eukaryotes SAR_Eukaryotes 80.9 3.34e-15   NR POM69893.1 4796 g11896 i0 47.5 3.25242718446602 80 41 77.7 1 29 268 1013 1091 POM69893.1 Hypothetical protein PHPALM_13794 [Phytophthora palmivora] diamond 1005 80.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
28640048 28640048 PRJNA482207_P_NODE_22507_length_248_cov_0.880000_g22397_i0 PRJNA482207 22507 248 0.88 2.1824 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 66.2 2.08e-10   NR XP_067818018.1 4779 g22397 i0 48.7 5.41935483870968 78 40 94.4 0 237 4 630 707 XP_067818018.1 hypothetical protein CCR75_000479 [Bremia lactucae] diamond 1344 66.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
28812853 28812853 PRJNA482207_P_NODE_9828_length_332_cov_0.976834_g9718_i0 PRJNA482207 9828 332 0.976834 3.24308888 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.0167   NR KAF1315262.1 82926 g9718 i0 38.5 0.587349397590361 65 36 56.9 2 276 88 1862 1924 KAF1315262.1 Copia protein, partial [Globisporangium splendens] diamond 195 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28829158 28829158 PRJNA482207_P_NODE_24348_length_247_cov_0.885057_g24238_i0 PRJNA482207 24348 247 0.885057 2.18609079 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 51.2 4.16e-5   NR DBA03585.1 4803 g24238 i0 36.5 9.30364372469636 63 40 76.5 0 59 247 44 106 DBA03585.1 TPA: hypothetical protein N0F65_011486 [Lagenidium giganteum] diamond 2298 51.6 0.992248062015504 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28892214 28892214 PRJNA482207_P_NODE_23608_length_247_cov_0.885057_g23498_i0 PRJNA482207 23608 247 0.885057 2.18609079 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.9e-4   NR KUF78919.1 4792 g23498 i0 39.3 5.19838056680162 61 37 74.1 0 211 29 359 419 KUF78919.1 hypothetical protein AM587_10000704 [Phytophthora nicotianae] diamond 1284 49.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
28939605 28939605 PRJNA482207_P_NODE_19788_length_251_cov_0.865169_g19678_i0 PRJNA482207 19788 251 0.865169 2.17157419 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 50.8 4.95e-5   NR KAF0738930.1 100861 g19678 i0 41 1.45816733067729 61 36 72.9 0 219 37 104 164 KAF0738930.1 hypothetical protein Ae201684_005301 [Aphanomyces euteiches] diamond 366 50.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29050427 29050427 PRJNA482207_P_NODE_13828_length_293_cov_1.204545_g13718_i0 PRJNA482207 13828 293 1.204545 3.52931685 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 99.4 1.6400000000000001e-22   NR KAH9105496.1 100861 g13718 i0 48.9 1.93515358361775 94 47 96.2 1 9 290 79 171 KAH9105496.1 hypothetical protein AeMF1_018708 [Aphanomyces euteiches] diamond 567 99.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29113540 29113540 PRJNA482207_P_NODE_11648_length_312_cov_1.288703_g11538_i0 PRJNA482207 11648 312 1.288703 4.02075336 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 104 1.42e-23   NR POM78802.1 4796 g11538 i0 50.5 7.86538461538461 97 48 93.3 0 292 2 17 113 POM78802.1 Hypothetical protein PHPALM_3632, partial [Phytophthora palmivora] diamond 2454 104 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
29160777 29160777 PRJNA482207_P_NODE_3469_length_506_cov_0.782910_g3359_i0 PRJNA482207 3469 506 0.78291 3.9615246 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 138 3.27e-34   NR KAF0732614.1 100861 g3359 i0 40 10.1561264822134 165 97 96.6 2 15 503 236 400 KAF0732614.1 hypothetical protein Ae201684_010322 [Aphanomyces euteiches] diamond 5139 138 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29286663 29286663 PRJNA482207_P_NODE_26889_length_244_cov_0.900585_g26779_i0 PRJNA482207 26889 244 0.900585 2.1974274 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 79.7 2.19e-15   NR RLN37861.1 2483409 g26779 i0 48.2 3.07377049180328 83 41 99.6 1 244 2 256 338 RLN37861.1 hypothetical protein BBJ28_00000464, partial [Nothophytophthora sp. Chile5] diamond 750 79.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
29555306 29555306 PRJNA482207_P_NODE_21670_length_249_cov_0.875000_g21560_i0 PRJNA482207 21670 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 64.3 1.03e-9   NR KAF4139171.1 4787 g21560 i0 37.3 4.92771084337349 102 42 96.4 2 1 240 358 459 KAF4139171.1 Transposase IS4 [Phytophthora infestans] diamond 1227 64.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
30029308 30029308 PRJNA482207_P_NODE_20391_length_250_cov_0.870056_g20281_i0 PRJNA482207 20391 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 52 2.03e-5   NR XP_002998582.1 403677 g20281 i0 40.3 9.84 72 42 85.2 1 6 218 34 105 XP_002998582.1 uncharacterized protein PITG_06473 [Phytophthora infestans T30-4] diamond 2460 52 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
30613276 30613276 PRJNA482207_P_NODE_23913_length_247_cov_0.885057_g23803_i0 PRJNA482207 23913 247 0.885057 2.18609079 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 60.1 2.85e-8   NR RLN97163.1 2483409 g23803 i0 44.8 0.704453441295547 58 32 70.4 0 183 10 171 228 RLN97163.1 hypothetical protein BBJ28_00019456 [Nothophytophthora sp. Chile5] diamond 174 60.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
30771547 30771547 PRJNA482207_P_NODE_26414_length_245_cov_0.895349_g26304_i0 PRJNA482207 26414 245 0.895349 2.19360505 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 86.3 1.8e-17   NR OWZ05910.1 4795 g26304 i0 52.4 1.02857142857143 84 36 99.2 2 1 243 210 292 OWZ05910.1 hypothetical protein PHMEG_00021917 [Phytophthora megakarya] diamond 252 86.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
31419544 31419544 PRJNA482207_P_NODE_20636_length_250_cov_0.870056_g20526_i0 PRJNA482207 20636 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 45.4 0.00452   NR KAE8995602.1 53985 g20526 i0 38.6 6.54 70 38 82.8 2 242 36 641 706 KAE8995602.1 hypothetical protein PF011_g16255 [Phytophthora fragariae] diamond 1635 45.8 0.991266375545852 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
31419545 31419545 PRJNA482207_P_NODE_7316_length_369_cov_1.040541_g7206_i0 PRJNA482207 7316 369 1.040541 3.83959629 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 60.1 1.21e-7   NR KUF91988.1 4792 g7206 i0 41.8 3.28455284552846 67 39 54.5 0 33 233 165 231 KUF91988.1 hypothetical protein AM587_10017553 [Phytophthora nicotianae] diamond 1212 60.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
31483099 31483099 PRJNA482207_P_NODE_11516_length_314_cov_0.821577_g11406_i0 PRJNA482207 11516 314 0.821577 2.57975178 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 96.7 1e-20   NR KAG2808417.1 29920 g11406 i0 50.5 17.7611464968153 93 45 87.9 1 10 285 476 568 KAG2808417.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Phytophthora cactorum] diamond 5577 96.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
32052251 32052251 PRJNA482207_P_NODE_17438_length_265_cov_1.203125_g17328_i0 PRJNA482207 17438 265 1.203125 3.18828125 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 51.2 4.89e-5   NR KAJ8579109.1 4785 g17328 i0 46 4.94716981132075 50 27 56.6 0 91 240 6 55 KAJ8579109.1 hypothetical protein ON010_g89 [Phytophthora cinnamomi] diamond 1311 51.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
32194414 32194414 PRJNA482207_P_NODE_22238_length_249_cov_0.875000_g22128_i0 PRJNA482207 22238 249 0.875 2.17875 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.59e-10   NR KAG9399900.1 112091 g22128 i0 46.4 2.55421686746988 69 36 83.1 1 247 41 26 93 KAG9399900.1 hypothetical protein AC1031_011321 [Aphanomyces cochlioides] diamond 636 65.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32257997 32257997 PRJNA482207_P_NODE_14618_length_287_cov_1.116822_g14508_i0 PRJNA482207 14618 287 1.116822 3.20527914 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0053   NR KAH9142154.1 100861 g14508 i0 42.9 2.04878048780488 49 28 51.2 0 287 141 435 483 KAH9142154.1 hypothetical protein AeRB84_013743 [Aphanomyces euteiches] diamond 588 45.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;