RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA482207" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA482207 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27107688 27107688 PRJNA482207_P_NODE_22382_length_248_cov_1.760000_g22272_i0 PRJNA482207 22382 248 1.76 4.3648 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 60.8 1.69e-8   NR AVM87439.1 3063761 g22272 i0 55.1 0.592741935483871 49 22 59.3 0 147 1 928 976 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 147 60.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
28118431 28118431 PRJNA482207_P_NODE_25865_length_245_cov_0.895349_g25755_i0 PRJNA482207 25865 245 0.895349 2.19360505 Lindangsbacken virus 2651947 Viruses Viruses 46.2 0.00231   NR QGA70947.1 2651947 g25755 i0 41.1 1.99591836734694 56 32 67.3 1 45 209 311 366 QGA70947.1 RNA-dependent RNA polymerase [Lindangsbacken virus] diamond 489 46.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Lindangsbacken virus
31814674 31814674 PRJNA482207_P_NODE_10617_length_323_cov_1.232000_g10507_i0 PRJNA482207 10617 323 1.232 3.97936 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 85.9 7.23e-17   NR UVF58820.1 3063761 g10507 i0 69.4 0.575851393188854 62 17 55.7 1 128 307 829 890 UVF58820.1 MAG: polyprotein [Asterropteryx spinosa picornavirus] diamond 186 85.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
32668393 32668393 PRJNA482207_P_NODE_8240_length_352_cov_2.182796_g8130_i0 PRJNA482207 8240 352 2.182796 7.68344192 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 130 3.2399999999999996e-32   NR AVM87439.1 3063761 g8130 i0 50.8 1.05681818181818 124 54 99.7 1 2 352 1019 1142 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 372 130 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;