RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA482207" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 7 ✖

bioproject 1

  • PRJNA482207 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13201647 13201647 PRJNA482207_P_NODE_24631_length_246_cov_0.890173_g24521_i0 PRJNA482207 24631 246 0.890173 2.18982558 Coccomyxa viridis 1274662 Plants Plants 95.1 1.47e-20   NR CAK0742420.1 1274662 g24521 i0 58.9 5.34146341463415 73 30 89 0 246 28 649 721 CAK0742420.1 hypothetical protein CVIRNUC_001395 [Coccomyxa viridis] diamond 1314 95.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
15750722 15750722 PRJNA482207_P_NODE_25933_length_245_cov_0.895349_g25823_i0 PRJNA482207 25933 245 0.895349 2.19360505 Picochlorum sp. BPE23 2696299 Plants Plants 103 1.38e-25   NR KAI8111277.1 2696299 g25823 i0 61.7 2.97551020408163 81 31 99.2 0 1 243 36 116 KAI8111277.1 hypothetical protein M9434_004849 [Picochlorum sp. BPE23] diamond 729 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
24674164 24674164 PRJNA482207_P_NODE_25900_length_245_cov_0.895349_g25790_i0 PRJNA482207 25900 245 0.895349 2.19360505 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 131 2.76e-34   NR KAH7623926.1 1650286 g25790 i0 82.7 2.97551020408163 81 14 99.2 0 245 3 42 122 KAH7623926.1 putative 60S ribosomal protein L23a [Chlorella desiccata (nom. nud.)] diamond 729 131 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27850319 27850319 PRJNA482207_P_NODE_25324_length_246_cov_0.890173_g25214_i0 PRJNA482207 25324 246 0.890173 2.18982558 Chlamydomonadales 3042 Plants Plants 102 2.3e-23   NR KXZ48886.1 33097 g25214 i0 67.9 4.95121951219512 81 25 97.6 1 244 5 218 298 KXZ48886.1 hypothetical protein GPECTOR_24g175 [Gonium pectorale] diamond 1218 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
28244657 28244657 PRJNA482207_P_NODE_19386_length_251_cov_0.865169_g19276_i0 PRJNA482207 19386 251 0.865169 2.17157419 Dunaliella salina 3046 Plants Plants 152 5.16e-44   NR KAF5842932.1 3046 g19276 i0 92.5 0.956175298804781 80 6 95.6 0 12 251 1 80 KAF5842932.1 light harvesting complex a protein [Dunaliella salina] diamond 240 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31308529 31308529 PRJNA482207_P_NODE_27215_length_244_cov_0.900585_g27105_i0 PRJNA482207 27215 244 0.900585 2.1974274 Dunaliella salina 3046 Plants Plants 140 5.8e-41   NR KAF5841389.1 3046 g27105 i0 97.4 0.934426229508197 76 2 93.4 0 2 229 63 138 KAF5841389.1 hypothetical protein DUNSADRAFT_13257 [Dunaliella salina] diamond 228 140 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31656332 31656332 PRJNA482207_P_NODE_18497_length_257_cov_0.760870_g18387_i0 PRJNA482207 18497 257 0.76087 1.9554359 Haematococcus lacustris 44745 Plants Plants 92.4 1.49e-19   NR KAJ9504907.1 44745 g18387 i0 47.6 47.3463035019455 84 44 98.1 0 254 3 648 731 KAJ9504907.1 hypothetical protein QJQ45_030485 [Haematococcus lacustris] diamond 12168 92.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;