RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA474911" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA474911 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28497569 28497569 PRJNA474911_P_NODE_3527_length_318_cov_0.996109_g3401_i0 PRJNA474911 3527 318 0.996109 3.16762662 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 121 1.93e-29   NR AVM87439.1 3063761 g3401 i0 51.9 1.0188679245283 108 47 100 2 318 1 1461 1565 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 324 121 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
30266122 30266122 PRJNA474911_P_NODE_8512_length_190_cov_2.302326_g8385_i0 PRJNA474911 8512 190 2.302326 4.3744194 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 52.4 7.23e-6   NR AVM87439.1 3063761 g8385 i0 27.8 1.81578947368421 115 28 94.7 1 3 182 730 844 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 345 52.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
32762893 32762893 PRJNA474911_P_NODE_4020_length_293_cov_1.103448_g3893_i0 PRJNA474911 4020 293 1.103448 3.23310264 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 161 1.71e-43   NR AVM87439.1 3063761 g3893 i0 80.2 1.97610921501706 96 19 98.3 0 2 289 1206 1301 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 579 161 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;