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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA474426" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA474426 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27012929 27012929 PRJNA474426_P_NODE_36142_length_162_cov_2.725664_g35937_i0 PRJNA474426 36142 162 2.725664 4.41557568 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 73.2 2.26e-13   NR MBL9137825.1 2026801 g35937 i0 66 3.7037037037037 50 16 90.7 1 148 2 668 717 MBL9137825.1 PAS domain S-box protein [Verrucomicrobiales bacterium] diamond 600 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27455668 27455668 PRJNA474426_P_NODE_35803_length_163_cov_0.903509_g35598_i0 PRJNA474426 35803 163 0.903509 1.47271967 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 54.3 1.02e-6   NR MBI5767949.1 2026799 g35598 i0 58 0.920245398773006 50 21 92 0 12 161 1241 1290 MBI5767949.1 PAS domain S-box protein [Verrucomicrobiota bacterium] diamond 150 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27487065 27487065 PRJNA474426_P_NODE_27403_length_185_cov_1.507353_g27198_i0 PRJNA474426 27403 185 1.507353 2.78860305 Terrimicrobium sacchariphilum 690879 Bacteria Bacteria 103 2.0199999999999998e-24   NR WP_075079064.1 690879 g27198 i0 100 0.778378378378378 48 0 77.8 0 160 17 61 108 WP_075079064.1 sulfite exporter TauE/SafE family protein [Terrimicrobium sacchariphilum] diamond 144 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sacchariphilum
28150258 28150258 PRJNA474426_P_NODE_11485_length_314_cov_1.056604_g11280_i0 PRJNA474426 11485 314 1.056604 3.31773656 Terrimicrobium sacchariphilum 690879 Bacteria Bacteria 176 1.55e-53   NR WP_075081201.1 690879 g11280 i0 91 1.70063694267516 89 8 85 0 267 1 1 89 WP_075081201.1 rhomboid family intramembrane serine protease [Terrimicrobium sacchariphilum] diamond 534 176 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sacchariphilum
28276273 28276273 PRJNA474426_P_NODE_7786_length_387_cov_1.724852_g7582_i0 PRJNA474426 7786 387 1.724852 6.67517724 Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_1 1802433 Bacteria Bacteria 124 2.29e-31   NR OHE79004.1 1802433 g7582 i0 49.2 0.914728682170543 118 60 91.5 0 12 365 218 335 OHE79004.1 MAG: hypothetical protein A3F67_10845, partial [Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10] diamond 354 124 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10
28687135 28687135 PRJNA474426_P_NODE_2167_length_668_cov_3.046850_g2018_i0 PRJNA474426 2167 668 3.04685 20.352958 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 49.3 0.00717   NR MEI7774771.1 2026799 g2018 i0 54.2 0.215568862275449 48 18 21.6 2 342 199 784 827 MEI7774771.1 reverse transcriptase domain-containing protein [Verrucomicrobiota bacterium] diamond 144 49.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29003060 29003060 PRJNA474426_P_NODE_21528_length_214_cov_1.345455_g21323_i0 PRJNA474426 21528 214 1.345455 2.8792737 Rariglobus sp. 2706526 Bacteria Bacteria 111 1.44e-26   NR MEZ0218311.1 2706526 g21323 i0 75 0.953271028037383 68 17 95.3 0 1 204 401 468 MEZ0218311.1 cation:proton antiporter [Rariglobus sp.] diamond 204 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
29050424 29050424 PRJNA474426_P_NODE_8348_length_374_cov_1.350769_g8143_i0 PRJNA474426 8348 374 1.350769 5.05187606 Pseudomonadati 3379134 Bacteria Bacteria 139 2.21e-36   NR WP_078812920.1 48467 g8143 i0 86.8 7.25935828877005 76 10 61 0 373 146 53 128 WP_078812920.1 cytochrome ubiquinol oxidase subunit I [Prosthecobacter debontii] diamond 2715 139 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter debontii
29113537 29113537 PRJNA474426_P_NODE_12688_length_295_cov_7.922764_g12483_i0 PRJNA474426 12688 295 7.922764 23.3721538 Chthoniobacter 295577 Bacteria Bacteria 145 3.74e-39   NR WP_202797352.1 191863 g12483 i0 81.6 3.51864406779661 87 16 88.5 0 17 277 71 157 WP_202797352.1 (Fe-S)-binding protein [Chthoniobacter flavus] diamond 1038 146 0.993150684931507 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
29633691 29633691 PRJNA474426_P_NODE_33930_length_165_cov_1.758621_g33725_i0 PRJNA474426 33930 165 1.758621 2.90172465 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 61.2 3.8e-9   NR HEY0550975.1 2499141 g33725 i0 61.7 1.74545454545455 47 18 85.5 0 160 20 1035 1081 HEY0550975.1 immunoglobulin domain-containing protein [Verrucomicrobiia bacterium] diamond 288 61.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29807968 29807968 PRJNA474426_P_NODE_28191_length_182_cov_1.398496_g27986_i0 PRJNA474426 28191 182 1.398496 2.54526272 Pseudomonadati 3379134 Bacteria Bacteria 123 5.12e-33   NR MBI3852043.1 2026799 g27986 i0 98.3 1.91208791208791 58 1 95.6 0 182 9 73 130 MBI3852043.1 AAA family ATPase [Verrucomicrobiota bacterium] diamond 348 123 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29949924 29949924 PRJNA474426_P_NODE_13311_length_287_cov_2.466387_g13106_i0 PRJNA474426 13311 287 2.466387 7.07853069 Puniceicoccaceae bacterium 2026784 Bacteria Bacteria 135 1.6199999999999998e-35   NR MAV39023.1 2026784 g13106 i0 88.9 1.5052264808362401 72 8 75.3 0 20 235 272 343 MAV39023.1 phage portal protein [Puniceicoccaceae bacterium] diamond 432 135 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae   Puniceicoccaceae bacterium
29949930 29949930 PRJNA474426_P_NODE_33871_length_165_cov_2.439655_g33666_i0 PRJNA474426 33871 165 2.439655 4.02543075 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 40.4 0.0445   NR MDA1277473.1 2026799 g33666 i0 71.4 0.509090909090909 28 8 50.9 0 92 9 1 28 MDA1277473.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 84 40.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30361095 30361095 PRJNA474426_P_NODE_36192_length_162_cov_1.814159_g35987_i0 PRJNA474426 36192 162 1.814159 2.93893758 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 96.3 6.96e-23   NR MEX1049632.1 2562705 g35987 i0 88.7 0.981481481481482 53 6 98.1 0 2 160 84 136 MEX1049632.1 hypothetical protein [Akkermansiaceae bacterium] diamond 159 96.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
30487095 30487095 PRJNA474426_P_NODE_8013_length_381_cov_14.277108_g7808_i0 PRJNA474426 8013 381 14.277108 54.39578148 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 108 3.5300000000000003e-26   NR MCB1242637.1 2499141 g7808 i0 57.9 0.748031496062992 95 40 74.8 0 97 381 10 104 MCB1242637.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 285 108 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30661069 30661069 PRJNA474426_P_NODE_36713_length_162_cov_0.902655_g36508_i0 PRJNA474426 36713 162 0.902655 1.4623011 Bacteria 2 Bacteria Bacteria 73.6 1.64e-13   NR MCU0784392.1 2026799 g36508 i0 97.3 35.6296296296296 37 1 68.5 0 3 113 534 570 MCU0784392.1 Flp pilus assembly complex ATPase component TadA [Verrucomicrobiota bacterium] diamond 5772 73.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30961042 30961042 PRJNA474426_P_NODE_25754_length_192_cov_1.062937_g25549_i0 PRJNA474426 25754 192 1.062937 2.04083904 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 78.6 3.04e-15   NR MBL9169925.1 2026801 g25549 i0 61 0.921875 59 23 92.2 0 11 187 76 134 MBL9169925.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 177 78.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31498531 31498531 PRJNA474426_P_NODE_12676_length_296_cov_1.161943_g12471_i0 PRJNA474426 12676 296 1.161943 3.43935128 Prosthecobacter sp. 1965333 Bacteria Bacteria 111 3.2e-26   NR WP_397383654.1 1965333 g12471 i0 100 0.557432432432432 55 0 55.7 0 176 12 1 55 WP_397383654.1 esterase/lipase family protein [Prosthecobacter sp.] diamond 165 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
31514736 31514736 PRJNA474426_P_NODE_23576_length_202_cov_2.333333_g23371_i0 PRJNA474426 23576 202 2.333333 4.71333266 Rariglobus 2706524 Bacteria Bacteria 111 1.6500000000000002e-26   NR MCC6415431.1 2006848 g23371 i0 76.1 3.98019801980198 67 16 99.5 0 202 2 334 400 MCC6415431.1 cation:proton antiporter [Opitutaceae bacterium] diamond 804 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31656323 31656323 PRJNA474426_P_NODE_8597_length_368_cov_5.840125_g8392_i0 PRJNA474426 8597 368 5.840125 21.49166 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 113 1.66e-28   NR MES2737221.1 2026799 g8392 i0 51.8 0.91304347826087 112 48 91.3 3 339 4 26 131 MES2737221.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 336 113 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32036112 32036112 PRJNA474426_P_NODE_35018_length_164_cov_0.904348_g34813_i0 PRJNA474426 35018 164 0.904348 1.48313072 Rariglobus sp. 2706526 Bacteria Bacteria 59.3 1.8e-8   NR HEY8933372.1 2706526 g34813 i0 83.8 1.35365853658537 37 6 67.7 0 112 2 345 381 HEY8933372.1 polysaccharide biosynthesis tyrosine autokinase [Rariglobus sp.] diamond 222 59.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
32036113 32036113 PRJNA474426_P_NODE_7598_length_392_cov_1.860058_g7394_i0 PRJNA474426 7598 392 1.860058 7.29142736 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 171 7.87e-47   NR MBE7494985.1 2026800 g7394 i0 91 2.70918367346939 89 8 68.1 0 269 3 211 299 MBE7494985.1 zinc-binding dehydrogenase [Verrucomicrobiaceae bacterium] diamond 1062 171 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32668364 32668364 PRJNA474426_P_NODE_10140_length_337_cov_1.649306_g9935_i0 PRJNA474426 10140 337 1.649306 5.55816122 Opitutaceae bacterium 2006848 Bacteria Bacteria 113 7.080000000000001e-27   NR MBE2214387.1 2006848 g9935 i0 72 0.667655786350148 75 21 66.8 0 281 57 270 344 MBE2214387.1 ATP-binding protein [Opitutaceae bacterium] diamond 225 113 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32857350 32857350 PRJNA474426_P_NODE_15700_length_260_cov_1.957346_g15495_i0 PRJNA474426 15700 260 1.957346 5.0890996 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 136 6.28e-35   NR MEI7773971.1 2026799 g15495 i0 77.8 0.934615384615385 81 17 92.3 1 3 242 327 407 MEI7773971.1 reverse transcriptase domain-containing protein [Verrucomicrobiota bacterium] diamond 243 136 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;