RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA474426" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA474426 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29681420 29681420 PRJNA474426_P_NODE_34950_length_164_cov_0.904348_g34745_i0 PRJNA474426 34950 164 0.904348 1.48313072 Bacteria 2 Bacteria Bacteria 48.9 4.13e-5   NR MBP7638014.1 2212473 g34745 i0 54.1 1.99390243902439 37 17 67.7 0 113 3 17 53 MBP7638014.1 site-specific DNA-methyltransferase [Kiritimatiellia bacterium] diamond 327 49.3 0.991886409736308 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29791799 29791799 PRJNA474426_P_NODE_3111_length_585_cov_1.955224_g2939_i0 PRJNA474426 3111 585 1.955224 11.4380604 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 213 3.31e-65   NR MFA7174829.1 2212473 g2939 i0 59 0.912820512820513 178 73 91.3 0 584 51 90 267 MFA7174829.1 lysylphosphatidylglycerol synthase domain-containing protein [Kiritimatiellia bacterium] diamond 534 213 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;