RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA474426" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA474426 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27802949 27802949 PRJNA474426_P_NODE_6764_length_416_cov_3.043597_g6560_i0 PRJNA474426 6764 416 3.043597 12.66136352 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 72 4.15e-13   NR MCA9324642.1 2026720 g6560 i0 44.3 0.634615384615385 88 48 62.7 1 149 409 1 88 MCA9324642.1 RusA family crossover junction endodeoxyribonuclease [Candidatus Saccharibacteria bacterium] diamond 264 72 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28371081 28371081 PRJNA474426_P_NODE_28606_length_180_cov_2.229008_g28401_i0 PRJNA474426 28606 180 2.229008 4.0122144 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 81.3 4.1e-16   NR HET8708947.1 2973664 g28401 i0 74.5 0.783333333333333 47 12 78.3 0 143 3 116 162 HET8708947.1 phage terminase large subunit [Candidatus Saccharimonadales bacterium] diamond 141 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29349993 29349993 PRJNA474426_P_NODE_15689_length_260_cov_2.284360_g15484_i0 PRJNA474426 15689 260 2.28436 5.939336 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 135 8.5e-35   NR HEY5268624.1 2973664 g15484 i0 75.6 0.992307692307692 86 20 99.2 1 258 1 187 271 HEY5268624.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 258 135 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31166314 31166314 PRJNA474426_P_NODE_26575_length_188_cov_1.633094_g26370_i0 PRJNA474426 26575 188 1.633094 3.07021672 Bacteria 2 Bacteria Bacteria 44.7 0.00382   NR MDB5177258.1 2026720 g26370 i0 62.9 1.08510638297872 35 13 55.9 0 165 61 1143 1177 MDB5177258.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 204 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;