RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA474426" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA474426 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27250378 27250378 PRJNA474426_P_NODE_28323_length_181_cov_3.515152_g28118_i0 PRJNA474426 28323 181 3.515152 6.36242512 Bacteria 2 Bacteria Bacteria 112 5.38e-28   NR KKP23693.1 1618771 g28118 i0 92.9 24.1823204419889 56 4 92.8 0 179 12 109 164 KKP23693.1 MAG: Transketolase, central region [Candidatus Nomurabacteria bacterium GW2011_GWF2_30_133] diamond 4377 113 0.991150442477876 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWF2_30_133
27897385 27897385 PRJNA474426_P_NODE_9765_length_344_cov_1.708475_g9560_i0 PRJNA474426 9765 344 1.708475 5.877154 Candidatus Nomurabacteria bacterium GW2 2052152 Bacteria Bacteria 48.9 8.26e-4   NR KKP28291.1 1618763 g9560 i0 50 0.418604651162791 48 24 41.9 0 61 204 50 97 KKP28291.1 MAG: hypothetical protein UR18_C0006G0003 [Candidatus Nomurabacteria bacterium GW2011_GWE2_31_40] diamond 144 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWE2_31_40
31957242 31957242 PRJNA474426_P_NODE_30377_length_174_cov_0.888000_g30172_i0 PRJNA474426 30377 174 0.888 1.54512 Bacteria 2 Bacteria Bacteria 97.1 1.13e-21   NR MDB5260167.1 2052152 g30172 i0 78.9 5.89655172413793 57 12 98.3 0 4 174 163 219 MDB5260167.1 uvrA [Candidatus Nomurabacteria bacterium] diamond 1026 97.8 0.992842535787321 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32415963 32415963 PRJNA474426_P_NODE_5879_length_446_cov_3.949622_g5677_i0 PRJNA474426 5879 446 3.949622 17.61531412 Candidatus Nomurabacteria bacterium GW2 2052152 Bacteria Bacteria 96.7 4.58e-21   NR KKP87592.1 1618752 g5677 i0 92.3 0.349775784753363 52 4 35 0 194 349 19 70 KKP87592.1 MAG: Chemotaxis protein methyltransferase [Candidatus Nomurabacteria bacterium GW2011_GWC2_35_8] diamond 156 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWC2_35_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;