RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA474426" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA474426 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27202487 27202487 PRJNA474426_P_NODE_32142_length_168_cov_1.294118_g31937_i0 PRJNA474426 32142 168 1.294118 2.17411824 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 82.8 1.01e-16   NR NCN25909.1 2053554 g31937 i0 66.7 0.964285714285714 54 18 96.4 0 3 164 559 612 NCN25909.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 162 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
29981497 29981497 PRJNA474426_P_NODE_7251_length_401_cov_2.218750_g7047_i0 PRJNA474426 7251 401 2.21875 8.8971875 Candidatus Falkowbacteria bacterium GW2 2053554 Bacteria Bacteria 55.8 6.01e-6   NR KKQ53758.1 1618641 g7047 i0 40.8 1.11471321695761 98 38 58.4 3 282 49 2118 2215 KKQ53758.1 MAG: hypothetical protein US73_C0012G0043, partial [Candidatus Falkowbacteria bacterium GW2011_GWF2_38_1205] diamond 447 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium GW2011_GWF2_38_1205
32762890 32762890 PRJNA474426_P_NODE_35840_length_163_cov_0.903509_g35635_i0 PRJNA474426 35840 163 0.903509 1.47271967 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 62 2.02e-9   NR MBI5765966.1 2053554 g35635 i0 51.1 0.828220858895706 45 22 82.8 0 14 148 23 67 MBI5765966.1 glycosyltransferase family 39 protein [Candidatus Falkowbacteria bacterium] diamond 135 62 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;