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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA473824" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 35 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473824 · 35 ✖

analysis 1

  • diamond · 35 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5550008 5550008 PRJNA473824_P_NODE_141245_length_151_cov_5.263158_g140607_i0 PRJNA473824 141245 151 5.263158 7.94736858 Myxococcia 32015 Bacteria Bacteria 76.6 1.12e-14   NR MFO0670930.1 2268199 g140607 i0 56 12.0596026490066 75 7 97.4 1 150 4 207 281 MFO0670930.1 chemotaxis protein CheA [Polyangiaceae bacterium] diamond 1821 77 0.994805194805195 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
26633056 26633056 PRJNA473824_P_NODE_167301_length_150_cov_3.849558_g166663_i0 PRJNA473824 167301 150 3.849558 5.774337 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 53.9 1.16e-6   NR RYF12495.1 2026735 g166663 i0 56.4 1.1 55 18 98 1 149 3 534 588 RYF12495.1 MAG: hypothetical protein EOO40_01135 [Deltaproteobacteria bacterium] diamond 165 53.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26871247 26871247 PRJNA473824_P_NODE_84881_length_173_cov_3.220588_g84243_i0 PRJNA473824 84881 173 3.220588 5.57161724 Minicystis 1649470 Bacteria Bacteria 51.6 1.07e-5   NR HVY46112.1 1971901 g84243 i0 84 2.75722543352601 25 4 43.4 0 76 2 471 495 HVY46112.1 outer membrane protein transport protein [Minicystis sp.] diamond 477 52 0.992307692307692 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis sp.
26886580 26886580 PRJNA473824_P_NODE_141281_length_151_cov_5.245614_g140643_i0 PRJNA473824 141281 151 5.245614 7.92087714 Polyangiales bacterium 3034171 Bacteria Bacteria 55.5 4.6e-8   NR MFO0558232.1 3034171 g140643 i0 66 0.933774834437086 47 10 81.5 1 151 29 20 66 MFO0558232.1 hypothetical protein [Polyangiales bacterium] diamond 141 55.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
26886593 26886593 PRJNA473824_P_NODE_166341_length_150_cov_4.097345_g165703_i0 PRJNA473824 166341 150 4.097345 6.1460175 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47 3.28e-4   NR RYF12495.1 2026735 g165703 i0 88 0.5 25 3 50 0 77 3 958 982 RYF12495.1 MAG: hypothetical protein EOO40_01135 [Deltaproteobacteria bacterium] diamond 75 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27170827 27170827 PRJNA473824_P_NODE_100802_length_173_cov_2.757353_g100164_i0 PRJNA473824 100802 173 2.757353 4.77022069 Labilithrix sp. 1971228 Bacteria Bacteria 43.9 0.00562   NR HSO32767.1 1971228 g100164 i0 51 0.84971098265896 49 19 85 1 155 9 1 44 HSO32767.1 YeeE/YedE thiosulfate transporter family protein [Labilithrix sp.] diamond 147 43.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
27170869 27170869 PRJNA473824_P_NODE_44262_length_184_cov_2.551020_g43624_i0 PRJNA473824 44262 184 2.55102 4.6938768 Polyangiaceae bacterium 2268199 Bacteria Bacteria 60.1 1.26e-8   NR MFO0676467.1 2268199 g43624 i0 83.9 2.02173913043478 31 5 50.5 0 182 90 197 227 MFO0676467.1 protein kinase [Polyangiaceae bacterium] diamond 372 60.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27234303 27234303 PRJNA473824_P_NODE_94983_length_173_cov_2.860294_g94345_i0 PRJNA473824 94983 173 2.860294 4.94830862 Polyangiaceae bacterium 2268199 Bacteria Bacteria 47.8 2.47e-5   NR MCC6649381.1 2268199 g94345 i0 95.8 0.416184971098266 24 1 41.6 0 73 2 2 25 MCC6649381.1 hypothetical protein [Polyangiaceae bacterium] diamond 72 47.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28244643 28244643 PRJNA473824_P_NODE_89586_length_173_cov_3.088235_g88948_i0 PRJNA473824 89586 173 3.088235 5.34264655 Myxococcaceae bacterium 2484252 Bacteria Bacteria 49.7 5.2e-5   NR MBX7114876.1 2484252 g88948 i0 88 0.433526011560694 25 3 43.4 0 98 172 792 816 MBX7114876.1 hypothetical protein [Myxococcaceae bacterium] diamond 75 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
28371060 28371060 PRJNA473824_P_NODE_39846_length_192_cov_4.425806_g39208_i0 PRJNA473824 39846 192 4.425806 8.49754752 Polyangium jinanense 2829994 Bacteria Bacteria 67 5.08e-11   NR WP_272428178.1 2829994 g39208 i0 66.7 1.96875 63 21 98.4 0 189 1 146 208 WP_272428178.1 efflux RND transporter periplasmic adaptor subunit [Polyangium jinanense] diamond 378 67 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium jinanense
28450566 28450566 PRJNA473824_P_NODE_48506_length_177_cov_3.064286_g47868_i0 PRJNA473824 48506 177 3.064286 5.42378622 Pseudomonadati 3379134 Bacteria Bacteria 87.4 2.02e-18   NR WP_169343820.1 394095 g47868 i0 63.8 1.96610169491525 58 21 98.3 0 176 3 274 331 WP_169343820.1 restriction endonuclease subunit S [Pyxidicoccus fallax] diamond 348 87.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Pyxidicoccus Pyxidicoccus fallax
28465967 28465967 PRJNA473824_P_NODE_164606_length_150_cov_4.787611_g163968_i0 PRJNA473824 164606 150 4.787611 7.1814165 Polyangiaceae bacterium 2268199 Bacteria Bacteria 48.1 1.03e-4   NR HEX4514338.1 2268199 g163968 i0 87.5 1.46 24 3 48 0 150 79 75 98 HEX4514338.1 nucleotide sugar dehydrogenase [Polyangiaceae bacterium] diamond 219 48.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29223757 29223757 PRJNA473824_P_NODE_110789_length_173_cov_2.522059_g110151_i0 PRJNA473824 110789 173 2.522059 4.36316207 Myxococcales bacterium 2026763 Bacteria Bacteria 49.7 3.11e-5   NR MES1186422.1 2026763 g110151 i0 63.9 1.05780346820809 36 13 62.4 0 109 2 4 39 MES1186422.1 Uma2 family endonuclease [Myxococcales bacterium] diamond 183 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29444397 29444397 PRJNA473824_P_NODE_51470_length_173_cov_9.845588_g50832_i0 PRJNA473824 51470 173 9.845588 17.03286724 Polyangiaceae bacterium 2268199 Bacteria Bacteria 48.5 1.33e-4   NR HEY8089010.1 2268199 g50832 i0 91.3 0.398843930635838 23 2 39.9 0 171 103 361 383 HEY8089010.1 hypothetical protein [Polyangiaceae bacterium] diamond 69 48.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29871260 29871260 PRJNA473824_P_NODE_171471_length_150_cov_2.876106_g170833_i0 PRJNA473824 171471 150 2.876106 4.314159 Bacteria 2 Bacteria Bacteria 40.8 0.0488   NR MCA9511848.1 2026763 g170833 i0 57.1 1.12 28 12 56 0 65 148 186 213 MCA9511848.1 SGNH/GDSL hydrolase family protein [Myxococcales bacterium] diamond 168 40.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30266079 30266079 PRJNA473824_P_NODE_140112_length_151_cov_5.666667_g139474_i0 PRJNA473824 140112 151 5.666667 8.55666717 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.5 0.00551   NR HEX3343519.1 2268199 g139474 i0 87 0.456953642384106 23 3 45.7 0 81 149 19 41 HEX3343519.1 IS66 family transposase [Polyangiaceae bacterium] diamond 69 43.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30329531 30329531 PRJNA473824_P_NODE_88272_length_173_cov_3.132353_g87634_i0 PRJNA473824 88272 173 3.132353 5.41897069 Labilithrix sp. 1971228 Bacteria Bacteria 44.7 0.00306   NR HSO35764.1 1971228 g87634 i0 38.6 1.21387283236994 70 28 95.4 1 172 8 654 723 HSO35764.1 DUF1592 domain-containing protein [Labilithrix sp.] diamond 210 44.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30345668 30345668 PRJNA473824_P_NODE_169692_length_150_cov_3.300885_g169054_i0 PRJNA473824 169692 150 3.300885 4.9513275 Pseudomonadati 3379134 Bacteria Bacteria 53.1 2.17e-6   NR HEY8946095.1 2268199 g169054 i0 92 1.5 25 2 50 0 77 3 400 424 HEY8946095.1 oleate hydratase [Polyangiaceae bacterium] diamond 225 53.5 0.992523364485981 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30408634 30408634 PRJNA473824_P_NODE_59233_length_173_cov_4.963235_g58595_i0 PRJNA473824 59233 173 4.963235 8.58639655 Polyangiales 3031712 Bacteria Bacteria 52.4 5.76e-6   NR HEY8079080.1 1971228 g58595 i0 83.3 2.08092485549133 24 4 41.6 0 100 171 521 544 HEY8079080.1 bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein [Labilithrix sp.] diamond 360 52.8 0.992424242424242 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30487054 30487054 PRJNA473824_P_NODE_110333_length_173_cov_2.544118_g109695_i0 PRJNA473824 110333 173 2.544118 4.40132414 Polyangiaceae bacterium 2268199 Bacteria Bacteria 48.5 1.33e-4   NR HEY2513990.1 2268199 g109695 i0 40.8 2.51445086705202 71 28 98.8 1 172 2 640 710 HEY2513990.1 hypothetical protein [Polyangiaceae bacterium] diamond 435 48.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30866037 30866037 PRJNA473824_P_NODE_165454_length_150_cov_4.433628_g164816_i0 PRJNA473824 165454 150 4.433628 6.650442 Labilithrix sp. 1971228 Bacteria Bacteria 73.9 8.83e-14   NR MBX3224101.1 1971228 g164816 i0 69.8 2.12 53 11 96 1 149 6 194 246 MBX3224101.1 cupin domain-containing protein [Labilithrix sp.] diamond 318 73.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30929340 30929340 PRJNA473824_P_NODE_79134_length_173_cov_3.426471_g78496_i0 PRJNA473824 79134 173 3.426471 5.92779483 Labilithrix sp. 1971228 Bacteria Bacteria 58.2 1.06e-8   NR MDB4933655.1 1971228 g78496 i0 64.9 0.988439306358382 57 16 98.8 2 3 173 17 69 MDB4933655.1 hypothetical protein [Labilithrix sp.] diamond 171 58.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
31103287 31103287 PRJNA473824_P_NODE_169835_length_150_cov_3.283186_g169197_i0 PRJNA473824 169835 150 3.283186 4.924779 Bacteria 2 Bacteria Bacteria 51.6 7.95e-6   NR MEI6258608.1 2026735 g169197 i0 84 29.2 25 4 50 0 76 150 637 661 MEI6258608.1 DNA polymerase I [Deltaproteobacteria bacterium] diamond 4380 51.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31150051 31150051 PRJNA473824_P_NODE_97075_length_173_cov_2.830882_g96437_i0 PRJNA473824 97075 173 2.830882 4.89742586 Archangium lipolyticum 2970465 Bacteria Bacteria 48.5 1.33e-4   NR WP_257445987.1 2970465 g96437 i0 80 0.433526011560694 25 5 43.4 0 172 98 7 31 WP_257445987.1 protein NO VEIN domain-containing protein [Archangium lipolyticum] diamond 75 48.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium lipolyticum
31372021 31372021 PRJNA473824_P_NODE_50116_length_175_cov_1.217391_g49478_i0 PRJNA473824 50116 175 1.217391 2.13043425 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.00974   NR MBM4364276.1 2026735 g49478 i0 43.2 0.634285714285714 37 21 63.4 0 16 126 25 61 MBM4364276.1 S-adenosylmethionine decarboxylase [Deltaproteobacteria bacterium] diamond 111 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31403595 31403595 PRJNA473824_P_NODE_158516_length_151_cov_3.078947_g157878_i0 PRJNA473824 158516 151 3.078947 4.64920997 Sandaracinaceae bacterium 2510337 Bacteria Bacteria 44.7 0.00223   NR MBK8412809.1 2510337 g157878 i0 84.6 0.516556291390728 26 4 51.7 0 73 150 87 112 MBK8412809.1 FHA domain-containing protein [Sandaracinaceae bacterium] diamond 78 44.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium
31498488 31498488 PRJNA473824_P_NODE_108076_length_173_cov_2.610294_g107438_i0 PRJNA473824 108076 173 2.610294 4.51580862 Polyangiaceae bacterium 2268199 Bacteria Bacteria 50.8 2.01e-5   NR MCC6557283.1 2268199 g107438 i0 84 0.433526011560694 25 4 43.4 0 2 76 240 264 MCC6557283.1 hypothetical protein [Polyangiaceae bacterium] diamond 75 50.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31719758 31719758 PRJNA473824_P_NODE_169717_length_150_cov_3.300885_g169079_i0 PRJNA473824 169717 150 3.300885 4.9513275 Polyangiaceae bacterium 2268199 Bacteria Bacteria 50.8 1.42e-5   NR HEY8038445.1 2268199 g169079 i0 70 1.8 30 9 60 0 58 147 84 113 HEY8038445.1 FHA domain-containing protein [Polyangiaceae bacterium] diamond 270 50.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31751264 31751264 PRJNA473824_P_NODE_57837_length_173_cov_5.169118_g57199_i0 PRJNA473824 57837 173 5.169118 8.94257414 Kofleriaceae bacterium 2212474 Bacteria Bacteria 51.6 6.74e-6   NR HEU0036968.1 2212474 g57199 i0 100 1.30057803468208 25 0 43.4 0 173 99 135 159 HEU0036968.1 RlmE family RNA methyltransferase [Kofleriaceae bacterium] diamond 225 51.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31782812 31782812 PRJNA473824_P_NODE_114297_length_173_cov_2.323529_g113659_i0 PRJNA473824 114297 173 2.323529 4.01970517 Labilithrix luteola 1391654 Bacteria Bacteria 54.3 1.2e-6   NR WP_146648824.1 1391654 g113659 i0 47.8 1.16184971098266 67 21 91.9 1 10 168 351 417 WP_146648824.1 DUF1592 domain-containing protein [Labilithrix luteola] diamond 201 54.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
31846154 31846154 PRJNA473824_P_NODE_160337_length_151_cov_2.798246_g159699_i0 PRJNA473824 160337 151 2.798246 4.22535146 Polyangiaceae bacterium 2268199 Bacteria Bacteria 66.2 5.44e-11   NR MEO6573323.1 2268199 g159699 i0 51.5 1.3112582781457 66 16 99.3 1 1 150 229 294 MEO6573323.1 hypothetical protein [Polyangiaceae bacterium] diamond 198 66.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31972809 31972809 PRJNA473824_P_NODE_165938_length_150_cov_4.265487_g165300_i0 PRJNA473824 165938 150 4.265487 6.3982305 Myxococcaceae bacterium 2484252 Bacteria Bacteria 59.7 1.06e-8   NR MDB4977602.1 2484252 g165300 i0 63.6 0.88 44 16 88 0 15 146 501 544 MDB4977602.1 hypothetical protein [Myxococcaceae bacterium] diamond 132 59.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32194399 32194399 PRJNA473824_P_NODE_93058_length_173_cov_2.941176_g92420_i0 PRJNA473824 93058 173 2.941176 5.08823448 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47.8 2.5e-4   NR RYF12495.1 2026735 g92420 i0 92 0.433526011560694 25 2 43.4 0 3 77 350 374 RYF12495.1 MAG: hypothetical protein EOO40_01135 [Deltaproteobacteria bacterium] diamond 75 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32731477 32731477 PRJNA473824_P_NODE_151100_length_151_cov_3.649123_g150462_i0 PRJNA473824 151100 151 3.649123 5.51017573 Polyangiaceae bacterium 2268199 Bacteria Bacteria 60.8 1.2e-9   NR HXX68575.1 2268199 g150462 i0 40.2 1.9271523178807899 97 10 97.4 1 147 1 14 110 HXX68575.1 HPF/RaiA family ribosome-associated protein [Polyangiaceae bacterium] diamond 291 60.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32778797 32778797 PRJNA473824_P_NODE_118020_length_172_cov_3.200000_g117382_i0 PRJNA473824 118020 172 3.2 5.504 Bacteria 2 Bacteria Bacteria 75.5 4.13e-14   NR HYQ18527.1 2268199 g117382 i0 66.7 3.97674418604651 57 19 99.4 0 172 2 581 637 HYQ18527.1 efflux RND transporter permease subunit [Polyangiaceae bacterium] diamond 684 75.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;