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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA473824" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA473824 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18298654 18298654 PRJNA473824_P_NODE_55355_length_173_cov_5.698529_g54717_i0 PRJNA473824 55355 173 5.698529 9.85845517 Trebouxia 13786 Plants Plants 80.5 7e-16   NR KAL0035877.1 2905653 g54717 i0 71 7.49132947976879 62 12 97.1 1 169 2 284 345 KAL0035877.1 hypothetical protein WJX77_006076 [Trebouxia sp. C0004] diamond 1296 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
26902709 26902709 PRJNA473824_P_NODE_54501_length_173_cov_5.948529_g53863_i0 PRJNA473824 54501 173 5.948529 10.29095517 Chlorellaceae 35461 Plants Plants 50.4 2.74e-5   NR KAL4527278.1 1650286 g53863 i0 91.7 1.2485549132948 24 2 41.6 0 100 171 244 267 KAL4527278.1 hypothetical protein Ndes2437A_g02451 [Chlorella desiccata (nom. nud.)] diamond 216 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27044628 27044628 PRJNA473824_P_NODE_153582_length_151_cov_3.377193_g152944_i0 PRJNA473824 153582 151 3.377193 5.09956143 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 43.1 0.00782   NR KAG7666926.1 1650286 g152944 i0 63 1.0728476821192101 27 10 53.6 0 70 150 231 257 KAG7666926.1 hypothetical protein KSW81_000678 [Chlorella desiccata (nom. nud.)] diamond 162 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
27123660 27123660 PRJNA473824_P_NODE_113462_length_173_cov_2.389706_g112824_i0 PRJNA473824 113462 173 2.389706 4.13419138 root 1 Root_unresolved Root_unresolved 43.5 0.00782   NR KAK9819377.1 381761 g112824 i0 91.3 1.94219653179191 23 2 39.9 0 169 101 452 474 KAK9819377.1 hypothetical protein WJX81_001266 [Elliptochloris bilobata] diamond 336 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Elliptochloris Elliptochloris bilobata
27850306 27850306 PRJNA473824_P_NODE_126524_length_162_cov_4.496000_g125886_i0 PRJNA473824 126524 162 4.496 7.28352 Trebouxiophyceae 75966 Plants Plants 78.6 2.86e-15   NR YP_009105386.1 33092 g125886 i0 66 2.94444444444444 53 18 98.1 0 161 3 1204 1256 YP_009105386.1 cell division protein [Koliella longiseta] diamond 477 79.3 0.991172761664565 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
28166281 28166281 PRJNA473824_P_NODE_117705_length_172_cov_3.474074_g117067_i0 PRJNA473824 117705 172 3.474074 5.97540728 Chlorophyta 3041 Plants Plants 45.1 0.00225   NR KAK9809702.1 706552 g117067 i0 87.5 0.802325581395349 24 3 41.9 0 101 172 1426 1449 KAK9809702.1 hypothetical protein WJX73_007079 [Symbiochloris irregularis] diamond 138 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
28339527 28339527 PRJNA473824_P_NODE_132626_length_155_cov_0.991525_g131988_i0 PRJNA473824 132626 155 0.991525 1.53686375 Monoraphidium neglectum 145388 Plants Plants 40.4 0.0446   NR XP_013897247.1 145388 g131988 i0 40 0.774193548387097 40 24 77.4 0 147 28 52 91 XP_013897247.1 Protein SYM1 [Monoraphidium neglectum] diamond 120 40.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
28592228 28592228 PRJNA473824_P_NODE_80087_length_173_cov_3.382353_g79449_i0 PRJNA473824 80087 173 3.382353 5.85147069 [Myrmecia] bisecta 41462 Plants Plants 79.7 1.27e-15   NR KAK9819898.1 41462 g79449 i0 75 0.832369942196532 48 7 83.2 1 161 18 167 209 KAK9819898.1 hypothetical protein WJX72_003766 [[Myrmecia] bisecta] diamond 144 79.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
29081950 29081950 PRJNA473824_P_NODE_159668_length_151_cov_2.929825_g159030_i0 PRJNA473824 159668 151 2.929825 4.42403575 Chlorophyta 3041 Plants Plants 42 0.0197   NR CAD7701162.1 121088 g159030 i0 55.9 3.05960264900662 34 15 67.5 0 28 129 92 125 CAD7701162.1 unnamed protein product [Ostreobium quekettii] diamond 462 42.4 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
29633678 29633678 PRJNA473824_P_NODE_69270_length_173_cov_3.977941_g68632_i0 PRJNA473824 69270 173 3.977941 6.88183793 Bryopsis sp. KO-2 3115439 Plants Plants 49.3 6.43e-5   NR GMH32261.1 3041901 g68632 i0 59.5 0.641618497109827 37 13 60.7 1 129 25 196 232 GMH32261.1 hypothetical protein BSKO_00095 [Bryopsis sp. KO-2023] diamond 111 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
30534658 30534658 PRJNA473824_P_NODE_154593_length_151_cov_3.315789_g153955_i0 PRJNA473824 154593 151 3.315789 5.00684139 Chlorophyta 3041 Plants Plants 50.4 2.03e-5   NR CAD7699737.1 121088 g153955 i0 60 2.24503311258278 35 10 61.6 1 147 55 132 166 CAD7699737.1 unnamed protein product [Ostreobium quekettii] diamond 339 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
31403619 31403619 PRJNA473824_P_NODE_53476_length_173_cov_6.345588_g52838_i0 PRJNA473824 53476 173 6.345588 10.97786724 Trebouxia sp. C 2796353 Plants Plants 45.1 0.00223   NR KAL3133770.1 3373145 g52838 i0 85.7 0.815028901734104 21 3 36.4 0 3 65 141 161 KAL3133770.1 hypothetical protein ABBQ32_008252 [Trebouxia sp. C0010 RCD-2024] diamond 141 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;