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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA473799" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473799 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22772793 22772793 PRJNA473799_P_NODE_38638_length_249_cov_0.875000_g38364_i0 PRJNA473799 38638 249 0.875 2.17875 Fimbriimonas sp. 1936159 Bacteria Bacteria 141 1.84e-40   NR MEZ0325028.1 1936159 g38364 i0 85.4 5.92771084337349 82 12 98.8 0 247 2 46 127 MEZ0325028.1 ATP-dependent Clp protease proteolytic subunit [Fimbriimonas sp.] diamond 1476 141 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
26727600 26727600 PRJNA473799_P_NODE_47461_length_244_cov_1.403509_g47187_i0 PRJNA473799 47461 244 1.403509 3.42456196 Armatimonadota bacterium 2033014 Bacteria Bacteria 82 4.94e-16   NR MBV9850453.1 2033014 g47187 i0 50.6 0.995901639344262 81 38 99.6 1 2 244 50 128 MBV9850453.1 glycosyltransferase family 39 protein [Armatimonadota bacterium] diamond 243 82 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26776028 26776028 PRJNA473799_P_NODE_51181_length_242_cov_1.822485_g50907_i0 PRJNA473799 51181 242 1.822485 4.4104137 Bacillati 1783272 Bacteria Bacteria 94.7 1.87e-20   NR WP_348220012.1 2494211 g50907 i0 61 8.78925619834711 77 30 95.5 0 231 1 509 585 WP_348220012.1 tetratricopeptide repeat protein [Capsulimonas sp.] diamond 2127 94.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
27739926 27739926 PRJNA473799_P_NODE_46944_length_245_cov_0.895349_g46670_i0 PRJNA473799 46944 245 0.895349 2.19360505 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 41.6 0.0304   NR HTQ08895.1 2682144 g46670 i0 57.9 0.46530612244898 38 16 46.5 0 56 169 39 76 HTQ08895.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 114 41.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27834207 27834207 PRJNA473799_P_NODE_31844_length_255_cov_3.192308_g31570_i0 PRJNA473799 31844 255 3.192308 8.1403854 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.2 2.4e-15   NR HTE20708.1 2033014 g31570 i0 54.8 0.988235294117647 84 38 98.8 0 3 254 39 122 HTE20708.1 hypothetical protein [Armatimonadota bacterium] diamond 252 78.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28402646 28402646 PRJNA473799_P_NODE_28946_length_261_cov_1.101064_g28672_i0 PRJNA473799 28946 261 1.101064 2.87377704 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 119 7.46e-29   NR MCC7229885.1 2682144 g28672 i0 58.7 1.25287356321839 109 23 100 1 1 261 374 482 MCC7229885.1 NADH-quinone oxidoreductase subunit L [Fimbriimonadaceae bacterium] diamond 327 119 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28655313 28655313 PRJNA473799_P_NODE_33387_length_253_cov_1.166667_g33113_i0 PRJNA473799 33387 253 1.166667 2.95166751 Armatimonadota bacterium 2033014 Bacteria Bacteria 150 7.4e-40   NR MBM3457404.1 2033014 g33113 i0 83.1 0.984189723320158 83 14 98.4 0 251 3 609 691 MBM3457404.1 DUF1553 domain-containing protein [Armatimonadota bacterium] diamond 249 150 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31814602 31814602 PRJNA473799_P_NODE_34577_length_251_cov_1.179775_g34303_i0 PRJNA473799 34577 251 1.179775 2.96123525 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.3 2.99e-14   NR MCC2672330.1 2033014 g34303 i0 51.3 0.908366533864542 76 37 90.8 0 23 250 15 90 MCC2672330.1 hypothetical protein [Armatimonadota bacterium] diamond 228 74.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32004457 32004457 PRJNA473799_P_NODE_14718_length_290_cov_1.147465_g14444_i0 PRJNA473799 14718 290 1.147465 3.3276485 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 94.7 3.59e-20   NR HVK06613.1 2933160 g14444 i0 65.8 0.786206896551724 76 26 78.6 0 63 290 1088 1163 HVK06613.1 DNA polymerase III subunit alpha [Armatimonadaceae bacterium] diamond 228 94.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;