RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA473799" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA473799 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26727602 26727602 PRJNA473799_P_NODE_56301_length_232_cov_2.377358_g56027_i0 PRJNA473799 56301 232 2.377358 5.51547056 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 42.7 0.0315   NR HLP43682.1 2910166 g56027 i0 36.3 1.03448275862069 80 40 93.1 2 230 15 333 409 HLP43682.1 DDE-type integrase/transposase/recombinase [Candidatus Nanoarchaeia archaeon] diamond 240 42.7 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
30992543 30992543 PRJNA473799_P_NODE_29174_length_260_cov_1.647059_g28900_i0 PRJNA473799 29174 260 1.647059 4.2823534 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 54.3 3.91e-6   NR MCK5614488.1 2026773 g28900 i0 34.4 1.95 93 47 91.2 2 5 241 688 780 MCK5614488.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 507 54.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32888649 32888649 PRJNA473799_P_NODE_47640_length_244_cov_1.140351_g47366_i0 PRJNA473799 47640 244 1.140351 2.78245644 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 120 2.29e-29   NR HLC50183.1 2910166 g47366 i0 82.4 1.67213114754098 68 12 83.6 0 204 1 1 68 HLC50183.1 DNA topoisomerase I [Candidatus Nanoarchaeia archaeon] diamond 408 120 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;