RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA473799" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA473799 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26823170 26823170 PRJNA473799_P_NODE_34601_length_251_cov_1.179775_g34327_i0 PRJNA473799 34601 251 1.179775 2.96123525 Bodo saltans 75058 Euglenozoa other_Eukaryota 67.4 8.34e-11   NR CUG87023.1 75058 g34327 i0 47.4 0.681274900398406 57 30 68.1 0 81 251 36 92 CUG87023.1 membrane-associated protein, putative [Bodo saltans] diamond 171 67.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32226078 32226078 PRJNA473799_P_NODE_48498_length_244_cov_0.900585_g48224_i0 PRJNA473799 48498 244 0.900585 2.1974274 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 49.3 3.54e-5   NR KNH07262.1 1314962 g48224 i0 70.6 0.836065573770492 34 10 41.8 0 81 182 84 117 KNH07262.1 hypothetical protein XU18_1794 [Perkinsela sp. CCAP 1560/4] diamond 204 49.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;