RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA473641" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473641 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5548802 5548802 PRJNA473641_P_NODE_26165_length_241_cov_0.898810_g26082_i0 PRJNA473641 26165 241 0.89881 2.1661321 Agaricales 5338 Fungi Fungi 147 1.77e-39   NR XP_047749045.1 181762 g26082 i0 94.8 12.4605809128631 77 3 94.6 1 239 12 520 596 XP_047749045.1 Cytochrome P450 monooxygenase 91 [Psilocybe cubensis] diamond 3003 147 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Strophariaceae Psilocybe Psilocybe cubensis
29019002 29019002 PRJNA473641_P_NODE_9788_length_318_cov_1.257143_g9705_i0 PRJNA473641 9788 318 1.257143 3.99771474 Eukaryota 2759 Fungi Fungi 119 5.349999999999999e-32   NR CEH15934.1 401625 g9705 i0 61.9 4.65094339622642 97 37 91.5 0 291 1 29 125 CEH15934.1 histone partial [Ceraceosorus bombacis] diamond 1479 120 0.991666666666667 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Ceraceosorales Ceraceosoraceae Ceraceosorus Ceraceosorus bombacis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;