contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA473641" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 444891 | 444891 | PRJNA473641_P_NODE_14861_length_269_cov_1.341837_g14778_i0 | PRJNA473641 | 14861 | 269 | 1.341837 | 3.60954153 | root | 1 | Root_unresolved | Root_unresolved | 157 | 2e-47 | NR | WP_260644777.1 | 1280 | g14778 | i0 | 75.3 | 32.3866171003717 | 89 | 22 | 99.3 | 0 | 3 | 269 | 9 | 97 | WP_260644777.1 ribulose bisphosphate carboxylase small subunit [Staphylococcus aureus] | diamond | 8712 | 157 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 19570941 | 19570941 | PRJNA473641_P_NODE_4216_length_435_cov_1.552486_g4133_i0 | PRJNA473641 | 4216 | 435 | 1.552486 | 6.7533141 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 125 | 1.09e-34 | NR | MCU6128222.1 | 1496 | g4133 | i0 | 93.2 | 0.503448275862069 | 73 | 5 | 50.3 | 0 | 430 | 212 | 1 | 73 | MCU6128222.1 hypothetical protein [Clostridioides difficile] | diamond | 219 | 125 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 20846391 | 20846391 | PRJNA473641_P_NODE_1177_length_730_cov_2.686454_g1104_i0 | PRJNA473641 | 1177 | 730 | 2.686454 | 19.6111142 | Bacillati | 1783272 | Bacteria | Bacteria | 283 | 4.2899999999999997e-94 | NR | WP_262469944.1 | 1496 | g1104 | i0 | 88.7 | 1.32739726027397 | 159 | 18 | 65.3 | 0 | 662 | 186 | 1 | 159 | WP_262469944.1 pathogenesis-related BetVI family protein [Clostridioides difficile] | diamond | 969 | 285 | 0.992982456140351 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 29286576 | 29286576 | PRJNA473641_P_NODE_1249_length_712_cov_2.104851_g1172_i0 | PRJNA473641 | 1249 | 712 | 2.104851 | 14.98653912 | Peptococcaceae bacterium CEB3 | 999898 | Bacteria | Bacteria | 110 | 6.870000000000001e-27 | NR | KLU63339.1 | 999898 | g1172 | i0 | 52.2 | 0.484550561797753 | 115 | 55 | 48.5 | 0 | 499 | 155 | 10 | 124 | KLU63339.1 hypothetical protein CEB3_c02620 [Peptococcaceae bacterium CEB3] | diamond | 345 | 110 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Peptococcaceae | Peptococcaceae bacterium CEB3 | |||
| 29366080 | 29366080 | PRJNA473641_P_NODE_9449_length_322_cov_1.289157_g9366_i0 | PRJNA473641 | 9449 | 322 | 1.289157 | 4.15108554 | root | 1 | Root_unresolved | Root_unresolved | 157 | 9.749999999999999e-47 | NR | WP_236643868.1 | 1292 | g9366 | i0 | 72.5 | 7.06211180124224 | 109 | 26 | 99.7 | 3 | 1 | 321 | 27 | 133 | WP_236643868.1 photosystem I protein PsaO, partial [Staphylococcus warneri] | diamond | 2274 | 157 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 29570749 | 29570749 | PRJNA473641_P_NODE_6370_length_370_cov_2.737374_g6287_i0 | PRJNA473641 | 6370 | 370 | 2.737374 | 10.1282838 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 201 | 7.49e-64 | NR | WP_262469944.1 | 1496 | g6287 | i0 | 95.4 | 0.875675675675676 | 108 | 5 | 87.6 | 0 | 3 | 326 | 51 | 158 | WP_262469944.1 pathogenesis-related BetVI family protein [Clostridioides difficile] | diamond | 324 | 201 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 30724216 | 30724216 | PRJNA473641_P_NODE_24914_length_242_cov_0.911243_g24831_i0 | PRJNA473641 | 24914 | 242 | 0.911243 | 2.20520806 | root | 1 | Root_unresolved | Root_unresolved | 52 | 5.31e-7 | NR | MBO8631128.1 | 1280 | g24831 | i0 | 95.8 | 12.198347107438 | 24 | 1 | 29.8 | 0 | 3 | 74 | 12 | 35 | MBO8631128.1 hypothetical protein [Staphylococcus aureus] | diamond | 2952 | 52.4 | 0.99236641221374 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 32574201 | 32574201 | PRJNA473641_P_NODE_18539_length_250_cov_0.870056_g18456_i0 | PRJNA473641 | 18539 | 250 | 0.870056 | 2.17514 | Lysinibacillus sp. NPDC | 1869345 | Bacteria | Bacteria | 43.1 | 0.0168 | NR | WP_402865498.1 | 3364144 | g18456 | i0 | 45 | 0.48 | 40 | 19 | 44.4 | 1 | 13 | 123 | 115 | 154 | WP_402865498.1 hypothetical protein [Lysinibacillus sp. NPDC097287] | diamond | 120 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Lysinibacillus | Lysinibacillus sp. NPDC097287 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;