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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA473201" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA473201 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1719143 1719143 PRJNA473201_P_NODE_67362_length_250_cov_1.740113_g66620_i0 PRJNA473201 67362 250 1.740113 4.3502825 Polyangiaceae bacterium 2268199 Bacteria Bacteria 136 8.360000000000001e-36   NR MEB2310901.1 2268199 g66620 i0 76.8 3.876 82 19 98.4 0 246 1 108 189 MEB2310901.1 adenosylhomocysteinase [Polyangiaceae bacterium] diamond 969 136 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
14473224 14473224 PRJNA473201_P_NODE_80712_length_243_cov_0.905882_g79970_i0 PRJNA473201 80712 243 0.905882 2.20129326 Polyangiaceae bacterium 2268199 Bacteria Bacteria 135 2.85e-38   NR HEX7666565.1 2268199 g79970 i0 80 1.97530864197531 80 16 98.8 0 242 3 73 152 HEX7666565.1 amidohydrolase family protein [Polyangiaceae bacterium] diamond 480 135 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
26886526 26886526 PRJNA473201_P_NODE_71641_length_248_cov_0.880000_g70899_i0 PRJNA473201 71641 248 0.88 2.1824 Polyangiaceae bacterium 2268199 Bacteria Bacteria 57.4 2.58e-7   NR MCC6527321.1 2268199 g70899 i0 51.8 1.34274193548387 56 27 67.7 0 247 80 315 370 MCC6527321.1 hypothetical protein [Polyangiaceae bacterium] diamond 333 57.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28592157 28592157 PRJNA473201_P_NODE_64567_length_254_cov_1.403315_g63825_i0 PRJNA473201 64567 254 1.403315 3.5644201 Myxococcota bacterium 2818507 Bacteria Bacteria 54.7 2.73e-6   NR MEW5847593.1 2818507 g63825 i0 41 0.921259842519685 78 40 92.1 3 5 238 755 826 MEW5847593.1 hypothetical protein [Myxococcota bacterium] diamond 234 54.7 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29034351 29034351 PRJNA473201_P_NODE_83728_length_242_cov_0.911243_g82986_i0 PRJNA473201 83728 242 0.911243 2.20520806 Labilithrix sp. 1971228 Bacteria Bacteria 57 3.41e-7   NR HEY8076659.1 1971228 g82986 i0 42 1.00413223140496 81 38 89.3 3 240 25 185 265 HEY8076659.1 hypothetical protein [Labilithrix sp.] diamond 243 57 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29113520 29113520 PRJNA473201_P_NODE_79688_length_244_cov_0.900585_g78946_i0 PRJNA473201 79688 244 0.900585 2.1974274 Myxococcus 32 Bacteria Bacteria 58.2 5.86e-8   NR WP_234072210.1 83455 g78946 i0 41.4 2.97540983606557 87 39 99.6 4 2 244 70 150 WP_234072210.1 protease [Myxococcus stipitatus] diamond 726 58.5 0.994871794871795 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus stipitatus
31008642 31008642 PRJNA473201_P_NODE_74474_length_247_cov_0.885057_g73732_i0 PRJNA473201 74474 247 0.885057 2.18609079 Minicystis 1649470 Bacteria Bacteria 106 1.25e-24   NR MFT3771950.1 1971901 g73732 i0 63.4 14.9392712550607 82 29 99.6 1 247 2 243 323 MFT3771950.1 tetratricopeptide repeat protein [Minicystis sp.] diamond 3690 107 0.990654205607477 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis sp.
31893982 31893982 PRJNA473201_P_NODE_73417_length_247_cov_0.885057_g72675_i0 PRJNA473201 73417 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 43.9 0.0141   NR TMA41047.1 2026735 g72675 i0 37.5 3.80161943319838 56 34 68 1 245 78 128 182 TMA41047.1 MAG: alpha/beta hydrolase [Deltaproteobacteria bacterium] diamond 939 44.3 0.99097065462754 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31909490 31909490 PRJNA473201_P_NODE_59337_length_268_cov_1.246154_g58595_i0 PRJNA473201 59337 268 1.246154 3.33969272 Kofleriaceae bacterium 2212474 Bacteria Bacteria 42.4 0.0496   NR MEZ4401898.1 2212474 g58595 i0 42 0.559701492537313 50 29 56 0 106 255 37 86 MEZ4401898.1 hypothetical protein [Kofleriaceae bacterium] diamond 150 42.4 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32447619 32447619 PRJNA473201_P_NODE_74099_length_247_cov_0.885057_g73357_i0 PRJNA473201 74099 247 0.885057 2.18609079 Myxococcota bacterium 2818507 Bacteria Bacteria 65.1 4.96e-10   NR MCS6912558.1 2818507 g73357 i0 46.4 1.59109311740891 69 36 83.8 1 33 239 263 330 MCS6912558.1 amidase [Myxococcota bacterium] diamond 393 65.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32636633 32636633 PRJNA473201_P_NODE_81620_length_243_cov_0.905882_g80878_i0 PRJNA473201 81620 243 0.905882 2.20129326 Myxococcaceae bacterium 2484252 Bacteria Bacteria 47.8 6.32e-4   NR MDB5216023.1 2484252 g80878 i0 41.1 0.901234567901235 73 35 88.9 3 239 24 673 738 MDB5216023.1 hypothetical protein [Myxococcaceae bacterium] diamond 219 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
32762791 32762791 PRJNA473201_P_NODE_74940_length_246_cov_1.462428_g74198_i0 PRJNA473201 74940 246 1.462428 3.59757288 Myxococcota bacterium 2818507 Bacteria Bacteria 60.8 1.58e-8   NR MEQ1503773.1 2818507 g74198 i0 52.7 4.02439024390244 55 23 63.4 1 1 156 365 419 MEQ1503773.1 beta-ketoacyl synthase N-terminal-like domain-containing protein [Myxococcota bacterium] diamond 990 60.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32888620 32888620 PRJNA473201_P_NODE_78840_length_244_cov_0.900585_g78098_i0 PRJNA473201 78840 244 0.900585 2.1974274 Myxococcota bacterium 2818507 Bacteria Bacteria 45.4 0.00438   NR MFT7582533.1 2818507 g78098 i0 42.3 1.2172131147541 52 27 60.2 1 237 91 34 85 MFT7582533.1 hypothetical protein [Myxococcota bacterium] diamond 297 45.4 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;