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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA473201" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA473201 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
443393 443393 PRJNA473201_P_NODE_17481_length_476_cov_1.558313_g16739_i0 PRJNA473201 17481 476 1.558313 7.41756988 Auxenochlorella protothecoides 3075 Plants Plants 173 1.78e-52   NR XP_011398628.1 3075 g16739 i0 69.5 2.38235294117647 131 39 82.6 1 25 417 1 130 XP_011398628.1 40S ribosomal protein S17 [Auxenochlorella protothecoides] diamond 1134 173 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
1718988 1718988 PRJNA473201_P_NODE_59202_length_268_cov_1.579487_g58460_i0 PRJNA473201 59202 268 1.579487 4.23302516 Chlorella sorokiniana 3076 Plants Plants 103 1.52e-26   NR PRW56617.1 3076 g58460 i0 61.4 2.97761194029851 88 34 98.5 0 264 1 2 89 PRW56617.1 60S ribosomal L36-3-like [Chlorella sorokiniana] diamond 798 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
2995313 2995313 PRJNA473201_P_NODE_84243_length_241_cov_2.309524_g83501_i0 PRJNA473201 84243 241 2.309524 5.56595284 Eukaryota 2759 Plants Plants 109 2.28e-29   NR XP_011398242.1 3075 g83501 i0 79.7 38.1784232365145 69 14 85.9 0 234 28 1 69 XP_011398242.1 60S ribosomal protein L38 [Auxenochlorella protothecoides] diamond 9201 109 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
6821286 6821286 PRJNA473201_P_NODE_30626_length_357_cov_1.591549_g29884_i0 PRJNA473201 30626 357 1.591549 5.68182993 Ostreococcus tauri 70448 Plants Plants 151 2.1200000000000001e-44   NR OUS48533.1 70448 g29884 i0 72.9 7.3781512605042 107 25 89.9 2 322 2 1 103 OUS48533.1 ribosomal protein S11 component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus tauri] diamond 2634 151 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus tauri
9371417 9371417 PRJNA473201_P_NODE_29728_length_362_cov_1.598616_g28986_i0 PRJNA473201 29728 362 1.598616 5.78698992 Chloropicon primus 1764295 Plants Plants 79.7 1.92e-16   NR QDZ23776.1 1764295 g28986 i0 35.8 2.78453038674033 109 63 84.5 2 336 31 2 110 QDZ23776.1 hypothetical protein A3770_11p62940 [Chloropicon primus] diamond 1008 79.7 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
11922088 11922088 PRJNA473201_P_NODE_15450_length_507_cov_2.350230_g14709_i0 PRJNA473201 15450 507 2.35023 11.9156661 Eukaryota 2759 Plants Plants 218 8.9e-70   NR RMZ53584.1 3075 g14709 i0 73.6 7.04733727810651 148 38 87.6 1 487 44 1 147 RMZ53584.1 hypothetical protein APUTEX25_003406 [Auxenochlorella protothecoides] diamond 3573 218 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
11922868 11922868 PRJNA473201_P_NODE_61610_length_262_cov_1.222222_g60868_i0 PRJNA473201 61610 262 1.222222 3.20222164 Prototheca wickerhamii 3111 Plants Plants 114 1.48e-28   NR KAK2077087.1 3111 g60868 i0 65.1 0.984732824427481 86 30 98.5 0 261 4 65 150 KAK2077087.1 60S ribosomal protein L5-B [Prototheca wickerhamii] diamond 258 114 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
18296016 18296016 PRJNA473201_P_NODE_72335_length_248_cov_0.880000_g71593_i0 PRJNA473201 72335 248 0.88 2.1824 Eukaryota 2759 Plants Plants 103 5.48e-26   NR KAI8467104.1 39955 g71593 i0 68.5 10.875 73 23 88.3 0 2 220 66 138 KAI8467104.1 MAG: translation protein SH3-like domain-containing protein [Monoraphidium minutum] diamond 2697 104 0.990384615384615 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
20845313 20845313 PRJNA473201_P_NODE_31677_length_352_cov_0.931900_g30935_i0 PRJNA473201 31677 352 0.9319 3.280288 Eukaryota 2759 Plants Plants 212 4.58e-61   NR KAI3437883.1 3077 g30935 i0 89.7 23.7102272727273 116 12 98.9 0 2 349 298 413 KAI3437883.1 hypothetical protein D9Q98_000328 [Chlorella vulgaris] diamond 8346 214 0.990654205607477 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
22120765 22120765 PRJNA473201_P_NODE_64938_length_253_cov_1.422222_g64196_i0 PRJNA473201 64938 253 1.422222 3.59822166 [Myrmecia] bisecta 41462 Plants Plants 85.9 1.9e-18   NR KAK9817689.1 41462 g64196 i0 83.7 4.06719367588933 49 8 58.1 0 252 106 160 208 KAK9817689.1 hypothetical protein WJX72_000657 [[Myrmecia] bisecta] diamond 1029 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
26981206 26981206 PRJNA473201_P_NODE_79442_length_244_cov_0.900585_g78700_i0 PRJNA473201 79442 244 0.900585 2.1974274 Sanguina aurantia 2578422 Plants Plants 84.7 2.52e-17   NR MEW5299291.1 2578422 g78700 i0 71.9 0.700819672131147 57 14 70.1 1 178 8 79 133 MEW5299291.1 hypothetical protein [Sanguina aurantia] diamond 171 84.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
27123645 27123645 PRJNA473201_P_NODE_28782_length_368_cov_1.044068_g28040_i0 PRJNA473201 28782 368 1.044068 3.84217024 Chlorophyta 3041 Plants Plants 169 3.12e-49   NR BDA47994.1 2315456 g28040 i0 92 5.71467391304348 87 7 70.9 0 5 265 244 330 BDA47994.1 Chlorophyll a-b binding protein of LHCII type I, chloroplastic [Coccomyxa sp. Obi] diamond 2103 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27155154 27155154 PRJNA473201_P_NODE_83522_length_242_cov_0.911243_g82780_i0 PRJNA473201 83522 242 0.911243 2.20520806 Trebouxiaceae 2507902 Plants Plants 68.2 3.89e-11   NR KAK9817021.1 41462 g82780 i0 56.9 2.18181818181818 58 24 71.9 1 11 184 370 426 KAK9817021.1 hypothetical protein WJX72_008478 [[Myrmecia] bisecta] diamond 528 68.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
27471684 27471684 PRJNA473201_P_NODE_22963_length_411_cov_1.594675_g22221_i0 PRJNA473201 22963 411 1.594675 6.55411425 Chlorellaceae 35461 Plants Plants 65.9 9.68e-10   NR PRW39386.1 3076 g22221 i0 56.4 4.70802919708029 55 23 39.4 1 410 249 204 258 PRW39386.1 40S ribosomal S3a-2 isoform B [Chlorella sorokiniana] diamond 1935 65.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27471689 27471689 PRJNA473201_P_NODE_48903_length_294_cov_5.619910_g48161_i0 PRJNA473201 48903 294 5.61991 16.5225354 Chlorophyta 3041 Plants Plants 47.8 0.0012   NR OUS44376.1 70448 g48161 i0 34.1 3.33673469387755 85 50 86.7 1 5 259 966 1044 OUS44376.1 photosystem I psaA/psaB protein-domain-containing protein [Ostreococcus tauri] diamond 981 48.1 0.993762993762994 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus tauri
28323954 28323954 PRJNA473201_P_NODE_31246_length_354_cov_1.096085_g30504_i0 PRJNA473201 31246 354 1.096085 3.8801409 Viridiplantae 33090 Plants Plants 120 1.4099999999999998e-32   NR XP_002502693.1 296587 g30504 i0 85.7 3.28813559322034 63 9 53.4 0 159 347 34 96 XP_002502693.1 predicted protein [Micromonas commoda] diamond 1164 120 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
28371003 28371003 PRJNA473201_P_NODE_59546_length_267_cov_2.108247_g58804_i0 PRJNA473201 59546 267 2.108247 5.62901949 Haematococcus lacustris 44745 Plants Plants 129 5.15e-35   NR GFH09102.1 44745 g58804 i0 98.4 0.707865168539326 63 1 70.8 0 3 191 194 256 GFH09102.1 predicted protein, partial [Haematococcus lacustris] diamond 189 129 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28465911 28465911 PRJNA473201_P_NODE_67106_length_251_cov_0.865169_g66364_i0 PRJNA473201 67106 251 0.865169 2.17157419 Haematococcus lacustris 44745 Plants Plants 42.4 0.0123   NR GFH21994.1 44745 g66364 i0 61.3 0.370517928286853 31 12 37.1 0 96 4 64 94 GFH21994.1 hypothetical protein HaLaN_19391 [Haematococcus lacustris] diamond 93 42.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28812751 28812751 PRJNA473201_P_NODE_86728_length_233_cov_2.806250_g85986_i0 PRJNA473201 86728 233 2.80625 6.5385625 Chlamydomonas reinhardtii 3055 Plants Plants 74.3 2.13e-13   NR XP_042923535.1 3055 g85986 i0 61 3.06437768240343 59 21 76 1 3 179 346 402 XP_042923535.1 uncharacterized protein CHLRE_06g263450v5 [Chlamydomonas reinhardtii] diamond 714 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
29318172 29318172 PRJNA473201_P_NODE_30929_length_355_cov_13.514184_g30187_i0 PRJNA473201 30929 355 13.514184 47.9753532 Picocystis salinarum 88271 Plants Plants 67.8 2.45e-11   NR YP_009057736.1 88271 g30187 i0 46.4 1.66478873239437 69 37 58.3 0 212 6 68 136 YP_009057736.1 hypothetical chloroplast RF3 [Picocystis salinarum] diamond 591 67.8 1 Eukaryota   Viridiplantae Chlorophyta Picocystophyceae Picocystales Picocystaceae Picocystis Picocystis salinarum
29412859 29412859 PRJNA473201_P_NODE_69689_length_249_cov_0.875000_g68947_i0 PRJNA473201 69689 249 0.875 2.17875 Haematococcus lacustris 44745 Plants Plants 179 9.229999999999999e-54   NR KAJ9523158.1 44745 g68947 i0 100 1.97590361445783 82 0 98.8 0 247 2 205 286 KAJ9523158.1 hypothetical protein QJQ45_024103 [Haematococcus lacustris] diamond 492 179 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
29475842 29475842 PRJNA473201_P_NODE_71690_length_248_cov_0.880000_g70948_i0 PRJNA473201 71690 248 0.88 2.1824 Volvox carteri f. nagariensis 3068 Plants Plants 54.7 2.25e-6   NR XP_002953678.1 3068 g70948 i0 44.3 0.737903225806452 61 33 72.6 1 235 56 230 290 XP_002953678.1 uncharacterized protein VOLCADRAFT_106032 [Volvox carteri f. nagariensis] diamond 183 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
29681405 29681405 PRJNA473201_P_NODE_24570_length_397_cov_2.049383_g23828_i0 PRJNA473201 24570 397 2.049383 8.13605051 Eukaryota 2759 Plants Plants 137 6.22e-38   NR XP_011396696.1 3075 g23828 i0 72.1 15.5894206549118 104 27 77.8 2 22 330 78 180 XP_011396696.1 60S ribosomal protein L18-3 [Auxenochlorella protothecoides] diamond 6189 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29886771 29886771 PRJNA473201_P_NODE_71191_length_248_cov_1.491429_g70449_i0 PRJNA473201 71191 248 1.491429 3.69874392 Haematococcus lacustris 44745 Plants Plants 127 3.39e-32   NR KAJ9528685.1 44745 g70449 i0 97.2 0.870967741935484 72 2 87.1 0 3 218 448 519 KAJ9528685.1 hypothetical protein QJQ45_020576 [Haematococcus lacustris] diamond 216 127 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30424126 30424126 PRJNA473201_P_NODE_84033_length_242_cov_0.911243_g83291_i0 PRJNA473201 84033 242 0.911243 2.20520806 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 119 6.31e-31   NR KAF6257032.1 2650976 g83291 i0 73.8 7.93388429752066 80 21 99.2 0 240 1 44 123 KAF6257032.1 component of cytosolic 80S ribosome and 40S small subunit [Scenedesmus sp. NREL 46B-D3] diamond 1920 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
30518501 30518501 PRJNA473201_P_NODE_78973_length_244_cov_0.900585_g78231_i0 PRJNA473201 78973 244 0.900585 2.1974274 Nannochloris 3187 Plants Plants 172 3.81e-49   NR 5YJ7_A 3187 g78231 i0 100 0.983606557377049 80 0 98.4 0 3 242 175 254 5YJ7_A Chain A, Glycoside hydrolase [Nannochloris] diamond 240 172 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris  
30581479 30581479 PRJNA473201_P_NODE_73493_length_247_cov_0.885057_g72751_i0 PRJNA473201 73493 247 0.885057 2.18609079 Ostreococcus lucimarinus CCE99 242159 Plants Plants 65.9 2.79e-10   NR XP_001422748.1 436017 g72751 i0 50 0.728744939271255 60 29 71.7 1 2 178 454 513 XP_001422748.1 predicted protein [Ostreococcus lucimarinus CCE9901] diamond 180 65.9 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus sp. 'lucimarinus'
30613169 30613169 PRJNA473201_P_NODE_60193_length_265_cov_25.333333_g59451_i0 PRJNA473201 60193 265 25.333333 67.13333245 Picochlorum sp. SENEW3 1470871 Plants Plants 50.4 1.9e-5   NR WPT18805.1 1470871 g59451 i0 43.8 0.826415094339623 73 41 82.6 0 47 265 50 122 WPT18805.1 hypothetical protein PSENEW3_10000089 [Picochlorum sp. SENEW3] diamond 219 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
30787493 30787493 PRJNA473201_P_NODE_81834_length_243_cov_0.905882_g81092_i0 PRJNA473201 81834 243 0.905882 2.20129326 Eukaryota 2759 Plants Plants 45.1 6.5e-4   NR KAF5837661.1 3046 g81092 i0 51.4 1.34567901234568 35 17 43.2 0 242 138 21 55 KAF5837661.1 hypothetical protein DUNSADRAFT_4094 [Dunaliella salina] diamond 327 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
30865971 30865971 PRJNA473201_P_NODE_15934_length_499_cov_15.176056_g15193_i0 PRJNA473201 15934 499 15.176056 75.72851944 Binuclearia lauterbornii 3087189 Plants Plants 87 1.55e-16   NR YP_009106243.1 3087189 g15193 i0 58.3 9.58917835671343 72 30 43.3 0 195 410 30 101 YP_009106243.1 ChlN subunit of protochlorophyllide reductase [Binuclearia lauterbornii] diamond 4785 87 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Oocystaceae Binuclearia Binuclearia lauterbornii
30897793 30897793 PRJNA473201_P_NODE_41534_length_312_cov_0.849372_g40792_i0 PRJNA473201 41534 312 0.849372 2.65004064 Haematococcus lacustris 44745 Plants Plants 90.1 3e-21   NR GFH16268.1 44745 g40792 i0 95.9 1.41346153846154 49 2 47.1 0 312 166 29 77 GFH16268.1 uncharacterized protein HaLaN_12654 [Haematococcus lacustris] diamond 441 90.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31814577 31814577 PRJNA473201_P_NODE_61237_length_263_cov_1.205263_g60495_i0 PRJNA473201 61237 263 1.205263 3.16984169 Haematococcus lacustris 44745 Plants Plants 135 3.27e-39   NR KAJ9526056.1 44745 g60495 i0 100 1.72243346007605 76 0 86.7 0 263 36 26 101 KAJ9526056.1 hypothetical protein QJQ45_009497 [Haematococcus lacustris] diamond 453 135 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31957216 31957216 PRJNA473201_P_NODE_29217_length_365_cov_1.582192_g28475_i0 PRJNA473201 29217 365 1.582192 5.7750008 Eukaryota 2759 Plants Plants 84.3 4.18e-16   NR KAK9805974.1 706552 g28475 i0 50 6.20547945205479 78 37 62.5 1 1 228 1306 1383 KAK9805974.1 hypothetical protein WJX73_010066 [Symbiochloris irregularis] diamond 2265 84.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
32636634 32636634 PRJNA473201_P_NODE_82120_length_243_cov_0.905882_g81378_i0 PRJNA473201 82120 243 0.905882 2.20129326 Haematococcus lacustris 44745 Plants Plants 168 3.09e-46   NR KAJ9528359.1 44745 g81378 i0 100 2.96296296296296 80 0 98.8 0 2 241 1067 1146 KAJ9528359.1 hypothetical protein QJQ45_014338 [Haematococcus lacustris] diamond 720 168 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;