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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA473201" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 11 ✖

bioproject 1

  • PRJNA473201 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10648244 10648244 PRJNA473201_P_NODE_73609_length_247_cov_0.885057_g72867_i0 PRJNA473201 73609 247 0.885057 2.18609079 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 165 2.4899999999999996e-47   NR WP_047381888.1 1340502 g72867 i0 98.8 0.983805668016194 81 1 98.4 0 245 3 81 161 WP_047381888.1 ABC transporter substrate-binding protein [Cetobacterium sp. ZWU0022] diamond 243 165 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
20845068 20845068 PRJNA473201_P_NODE_18257_length_465_cov_0.982143_g17515_i0 PRJNA473201 18257 465 0.982143 4.56696495 unclassified Cetobacterium 2630983 Bacteria Bacteria 308 7.519999999999998e-103   NR WP_047382551.1 2630983 g17515 i0 100 0.993548387096774 154 0 99.4 0 2 463 91 244 WP_047382551.1 MULTISPECIES: 3-deoxy-7-phosphoheptulonate synthase [unclassified Cetobacterium] diamond 462 308 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
26823144 26823144 PRJNA473201_P_NODE_71301_length_248_cov_1.257143_g70559_i0 PRJNA473201 71301 248 1.257143 3.11771464 unclassified Cetobacterium 2630983 Bacteria Bacteria 159 1.26e-43   NR WP_047384178.1 2630983 g70559 i0 97.6 0.991935483870968 82 2 99.2 0 248 3 409 490 WP_047384178.1 MULTISPECIES: elongation factor G [unclassified Cetobacterium] diamond 246 159 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27107587 27107587 PRJNA473201_P_NODE_55882_length_277_cov_1.509804_g55140_i0 PRJNA473201 55882 277 1.509804 4.18215708 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 180 3.7e-53   NR WP_294095619.1 527638 g55140 i0 100 0.985559566787004 91 0 98.6 0 3 275 102 192 WP_294095619.1 ROK family protein [uncultured Cetobacterium sp.] diamond 273 180 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
27138995 27138995 PRJNA473201_P_NODE_58462_length_270_cov_1.563452_g57720_i0 PRJNA473201 58462 270 1.563452 4.2213204 unclassified Cetobacterium 2630983 Bacteria Bacteria 134 1.35e-38   NR WP_047383608.1 2630983 g57720 i0 100 0.788888888888889 71 0 78.9 0 215 3 1 71 WP_047383608.1 MULTISPECIES: desulfoferrodoxin family protein [unclassified Cetobacterium] diamond 213 134 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29507625 29507625 PRJNA473201_P_NODE_40710_length_314_cov_1.261411_g39968_i0 PRJNA473201 40710 314 1.261411 3.96083054 Cetobacterium sp. 8H 2759681 Bacteria Bacteria 120 5.7e-29   NR WP_304488674.1 2759681 g39968 i0 73.9 0.878980891719745 92 24 87.9 0 312 37 629 720 WP_304488674.1 ATP-dependent zinc metalloprotease FtsH [Cetobacterium sp. 8H] diamond 276 120 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. 8H
30250565 30250565 PRJNA473201_P_NODE_84312_length_241_cov_1.773810_g83570_i0 PRJNA473201 84312 241 1.77381 4.2748821 Fusobacterium 848 Bacteria Bacteria 50.8 5.03e-5   NR WP_032834147.1 848 g83570 i0 52.9 1.9045643153527 51 20 58.5 2 239 99 1083 1133 WP_032834147.1 MULTISPECIES: hypothetical protein [Fusobacterium] diamond 459 50.8 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium  
30865987 30865987 PRJNA473201_P_NODE_74834_length_246_cov_2.115607_g74092_i0 PRJNA473201 74834 246 2.115607 5.20439322 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 170 6.94e-50   NR WP_294093214.1 527638 g74092 i0 98.8 0.98780487804878 81 1 98.8 0 244 2 205 285 WP_294093214.1 alanine racemase [uncultured Cetobacterium sp.] diamond 243 170 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
31292996 31292996 PRJNA473201_P_NODE_86075_length_241_cov_0.892857_g85333_i0 PRJNA473201 86075 241 0.892857 2.15178537 Cetobacterium 180162 Bacteria Bacteria 156 3.71e-45   NR MEG0514211.1 2071632 g85333 i0 95 1.99170124481328 80 4 99.6 0 240 1 100 179 MEG0514211.1 signal recognition particle receptor subunit alpha [Cetobacterium sp.] diamond 480 157 0.993630573248408 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
32495359 32495359 PRJNA473201_P_NODE_70439_length_249_cov_0.875000_g69697_i0 PRJNA473201 70439 249 0.875 2.17875 Cetobacterium 180162 Bacteria Bacteria 48.9 1.47e-4   NR WP_294096023.1 527638 g69697 i0 95.5 0.530120481927711 22 1 26.5 0 2 67 167 188 WP_294096023.1 RNA-guided endonuclease InsQ/TnpB family protein, partial [uncultured Cetobacterium sp.] diamond 132 48.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
32794075 32794075 PRJNA473201_P_NODE_30000_length_361_cov_1.034722_g29258_i0 PRJNA473201 30000 361 1.034722 3.73534642 Cetobacterium somerae 188913 Bacteria Bacteria 142 1.82e-36   NR WP_281700265.1 188913 g29258 i0 74.2 0.997229916897507 120 31 99.7 0 361 2 4 123 WP_281700265.1 ATP-dependent zinc metalloprotease FtsH [Cetobacterium somerae] diamond 360 142 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;