RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA459724" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA459724 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5546721 5546721 PRJNA459724_P_NODE_1385_length_493_cov_2.254310_g1055_i0 PRJNA459724 1385 493 2.25431 11.1137483 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 256 2.09e-80   NR MFI0436073.1 2052176 g1055 i0 84.1 0.955375253549696 157 25 95.5 0 491 21 328 484 MFI0436073.1 replicative DNA helicase [Parachlamydiaceae bacterium] diamond 471 256 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
26696192 26696192 PRJNA459724_P_NODE_301_length_1018_cov_4.123357_g179_i0 PRJNA459724 301 1018 4.123357 41.97577426 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 400 1.35e-137   NR MFI0436135.1 2052176 g179 i0 97.5 0.595284872298625 202 2 59.5 1 1018 413 47 245 MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] diamond 606 400 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
27234203 27234203 PRJNA459724_P_NODE_303_length_1016_cov_4.159068_g180_i0 PRJNA459724 303 1016 4.159068 42.25613088 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 399 5.299999999999998e-137   NR MFI0436135.1 2052176 g180 i0 97.5 0.593503937007874 201 2 59.4 1 2 604 48 245 MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] diamond 603 399 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
27518561 27518561 PRJNA459724_P_NODE_223_length_1184_cov_3.614719_g121_i0 PRJNA459724 223 1184 3.614719 42.79827296 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 399 2.09e-136   NR MFI0436135.1 2052176 g121 i0 97.5 0.511824324324324 202 2 51.2 1 1184 579 47 245 MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] diamond 606 399 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
27960528 27960528 PRJNA459724_P_NODE_3105_length_268_cov_2.882845_g2714_i0 PRJNA459724 3105 268 2.882845 7.7260246 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 140 4.15e-37   NR MFI0436073.1 2052176 g2714 i0 78.7 0.996268656716418 89 19 99.6 0 1 267 112 200 MFI0436073.1 replicative DNA helicase [Parachlamydiaceae bacterium] diamond 267 140 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
28529066 28529066 PRJNA459724_P_NODE_207_length_1211_cov_2.633672_g110_i0 PRJNA459724 207 1211 2.633672 31.89376792 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 527 1.1799999999999996e-180   NR MFI0436039.1 2052176 g110 i0 64.4 0.995871180842279 402 140 99.3 2 2 1204 8 407 MFI0436039.1 BT4734/BF3469 family protein [Parachlamydiaceae bacterium] diamond 1206 527 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
28592137 28592137 PRJNA459724_S_NODE_2087_length_167_cov_1.189394_g2084_i0 PRJNA459724 2087 167 1.189394 1.98628798 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 104 1.73e-25   NR MFV0339066.1 2052176 g2084 i0 92.7 0.988023952095808 55 4 98.8 0 1 165 26 80 MFV0339066.1 TIGR01777 family oxidoreductase [Parachlamydiaceae bacterium] diamond 165 104 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31181676 31181676 PRJNA459724_P_NODE_1555_length_458_cov_2.806527_g1208_i0 PRJNA459724 1555 458 2.806527 12.85389366 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 114 5.44e-28   NR MFI0435901.1 2052176 g1208 i0 82.8 0.419213973799127 64 11 41.9 0 457 266 207 270 MFI0435901.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 192 114 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31972731 31972731 PRJNA459724_P_NODE_1798_length_413_cov_2.632812_g1426_i0 PRJNA459724 1798 413 2.632812 10.87351356 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 118 8.69e-28   NR MFI0436039.1 2052176 g1426 i0 60 0.653753026634383 90 34 65.4 1 411 142 424 511 MFI0436039.1 BT4734/BF3469 family protein [Parachlamydiaceae bacterium] diamond 270 118 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31972733 31972733 PRJNA459724_P_NODE_3418_length_246_cov_3.087558_g3026_i0 PRJNA459724 3418 246 3.087558 7.59539268 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 169 1.12e-50   NR MFI0436136.1 2052176 g3026 i0 100 1.97560975609756 81 0 98.8 0 245 3 155 235 MFI0436136.1 phage portal protein [Parachlamydiaceae bacterium] diamond 486 169 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32415851 32415851 PRJNA459724_P_NODE_1159_length_546_cov_2.682785_g859_i0 PRJNA459724 1159 546 2.682785 14.6480061 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 115 1.1e-27   NR MFI0436074.1 2052176 g859 i0 53.5 0.697802197802198 127 52 67 4 421 56 149 273 MFI0436074.1 DUF6291 domain-containing protein [Parachlamydiaceae bacterium] diamond 381 115 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;