contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA454503" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26632977 | 26632977 | PRJNA454503_P_NODE_66941_length_207_cov_1.780822_g66612_i0 | PRJNA454503 | 66941 | 207 | 1.780822 | 3.68630154 | Candidatus Synechococcus spongiarum 142 | 1608213 | Bacteria | Bacteria | 40.8 | 0.0324 | NR | KKZ15259.1 | 1608213 | g66612 | i0 | 41.2 | 0.985507246376812 | 68 | 22 | 72.5 | 2 | 34 | 183 | 17 | 84 | KKZ15259.1 MAG: hypothetical protein TH68_01305 [Candidatus Synechococcus spongiarum 142] | diamond | 204 | 40.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Candidatus Synechococcus spongiarum | |
| 26934126 | 26934126 | PRJNA454503_P_NODE_68062_length_207_cov_0.890411_g67733_i0 | PRJNA454503 | 68062 | 207 | 0.890411 | 1.84315077 | Bacillati | 1783272 | Bacteria | Bacteria | 119 | 5.9400000000000005e-33 | NR | MBW4459677.1 | 1602008 | g67733 | i0 | 76.8 | 5 | 69 | 16 | 100 | 0 | 1 | 207 | 14 | 82 | MBW4459677.1 nuclear transport factor 2 family protein [Nodosilinea sp. WJT8-NPBG4] | diamond | 1035 | 119 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea sp. WJT8-NPBG4 | |
| 27865692 | 27865692 | PRJNA454503_P_NODE_50305_length_215_cov_1.688312_g49976_i0 | PRJNA454503 | 50305 | 215 | 1.688312 | 3.6298708 | Coleofasciculaceae cyanobacterium | 3081323 | Bacteria | Bacteria | 142 | 1.4e-38 | NR | HEY9771584.1 | 3081323 | g49976 | i0 | 97.2 | 0.990697674418605 | 71 | 2 | 99.1 | 0 | 213 | 1 | 227 | 297 | HEY9771584.1 sodium/proline symporter [Coleofasciculaceae cyanobacterium] | diamond | 213 | 142 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Coleofasciculales | Coleofasciculaceae | Coleofasciculaceae cyanobacterium | ||
| 29223693 | 29223693 | PRJNA454503_P_NODE_63249_length_208_cov_2.340136_g62920_i0 | PRJNA454503 | 63249 | 208 | 2.340136 | 4.86748288 | Synechococcus sp. R60.3 | 2967123 | Bacteria | Bacteria | 70.1 | 6.71e-14 | NR | MFS8799176.1 | 2967123 | g62920 | i0 | 67.3 | 0.706730769230769 | 49 | 16 | 70.7 | 0 | 55 | 201 | 27 | 75 | MFS8799176.1 hypothetical protein [Synechococcus sp. R60.3] | diamond | 147 | 70.1 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. R60.3 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;