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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA454503" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA454503 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8095789 8095789 PRJNA454503_P_NODE_59567_length_210_cov_0.872483_g59238_i0 PRJNA454503 59567 210 0.872483 1.8322143 Mycteria americana 33587 Chordata Chordata 59.7 2.46e-8   NR KAK4821667.1 33587 g59238 i0 55.8 1.1 77 26 98.6 2 2 208 10 86 KAK4821667.1 hypothetical protein QYF61_027135 [Mycteria americana] diamond 231 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Ciconiiformes Ciconiidae Mycteria Mycteria americana
26601006 26601006 PRJNA454503_P_NODE_5541_length_488_cov_1.302108_g5215_i0 PRJNA454503 5541 488 1.302108 6.35428704 Staurois parvus 386267 Chordata Chordata 58.5 1.14e-7   NR CAI9533415.1 386267 g5215 i0 40 2.07786885245902 110 47 55.9 4 372 100 1 110 CAI9533415.1 unnamed protein product [Staurois parvus] diamond 1014 58.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
27170777 27170777 PRJNA454503_P_NODE_69282_length_207_cov_0.890411_g68953_i0 PRJNA454503 69282 207 0.890411 1.84315077 Camelus dromedarius 9838 Chordata Chordata 50.1 5.97e-5   NR KAB1276036.1 9838 g68953 i0 51.5 0.985507246376812 68 29 92.8 1 194 3 13 80 KAB1276036.1 DnaJ-like protein subfamily C member 2 [Camelus dromedarius] diamond 204 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
27518558 27518558 PRJNA454503_P_NODE_80043_length_203_cov_1.830986_g79714_i0 PRJNA454503 80043 203 1.830986 3.71690158 Pterocles gutturalis 240206 Chordata Chordata 45.8 0.00159   NR KFV04360.1 240206 g79714 i0 60.6 0.487684729064039 33 13 48.8 0 27 125 178 210 KFV04360.1 hypothetical protein N339_07258, partial [Pterocles gutturalis] diamond 99 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Pterocliformes Pteroclidae Pterocles Pterocles gutturalis
28939470 28939470 PRJNA454503_P_NODE_49188_length_216_cov_1.677419_g48859_i0 PRJNA454503 49188 216 1.677419 3.62322504 Zalophus californianus 9704 Chordata Chordata 45.4 0.00265   NR XP_027455863.1 9704 g48859 i0 50 0.666666666666667 48 24 66.7 0 26 169 27 74 XP_027455863.1 uncharacterized protein LOC113925395 [Zalophus californianus] diamond 144 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Otariidae Zalophus Zalophus californianus
29002942 29002942 PRJNA454503_P_NODE_63548_length_208_cov_1.768707_g63219_i0 PRJNA454503 63548 208 1.768707 3.67891056 Grus japonensis 30415 Chordata Chordata 53.9 2.19e-6   NR GAB0210180.1 30415 g63219 i0 46.8 1.78846153846154 62 31 88 2 197 15 170 230 GAB0210180.1 mitochondrial enolase superfamily member 1 [Grus japonensis] diamond 372 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Gruiformes Gruidae Grus Grus japonensis
29192059 29192059 PRJNA454503_P_NODE_85729_length_202_cov_0.921986_g85400_i0 PRJNA454503 85729 202 0.921986 1.86241172 Limosa lapponica baueri 1758121 Chordata Chordata 40 0.049   NR PKU46666.1 1758121 g85400 i0 75 0.356435643564356 24 6 35.6 0 200 129 56 79 PKU46666.1 hypothetical protein llap_3054 [Limosa lapponica baueri] diamond 72 40 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Scolopacidae Limosa Limosa lapponica
29254833 29254833 PRJNA454503_P_NODE_67089_length_207_cov_1.767123_g66760_i0 PRJNA454503 67089 207 1.767123 3.65794461 Polypterus senegalus 55291 Chordata Chordata 59.3 3e-8   NR KAG2464344.1 55291 g66760 i0 58.2 0.797101449275362 55 23 79.7 0 206 42 31 85 KAG2464344.1 TCB1 transposase, partial [Polypterus senegalus] diamond 165 59.3 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
29665182 29665182 PRJNA454503_P_NODE_85950_length_202_cov_0.921986_g85621_i0 PRJNA454503 85950 202 0.921986 1.86241172 Canis lupus familiaris 9615 Chordata Chordata 41.6 0.0472   NR XP_022282620.2 9615 g85621 i0 73.9 0.683168316831683 23 6 34.2 0 6 74 120 142 XP_022282620.2 USP6 N-terminal-like protein isoform X2 [Canis lupus familiaris] diamond 138 41.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
29681398 29681398 PRJNA454503_P_NODE_51150_length_214_cov_1.699346_g50821_i0 PRJNA454503 51150 214 1.699346 3.63660044 Aves 8782 Chordata Chordata 92.4 7.87e-20   NR GAB0183584.1 30415 g50821 i0 62.9 19.5981308411215 70 26 98.1 0 214 5 155 224 GAB0183584.1 mitochondrial enolase superfamily member 1 [Grus japonensis] diamond 4194 92.4 1 Eukaryota Opisthokonta Metazoa Chordata Aves Gruiformes Gruidae Grus Grus japonensis
29760103 29760103 PRJNA454503_P_NODE_59331_length_210_cov_0.872483_g59002_i0 PRJNA454503 59331 210 0.872483 1.8322143 Staurois parvus 386267 Chordata Chordata 51.2 1.61e-6   NR CAI9540006.1 386267 g59002 i0 53.1 0.7 49 23 70 0 52 198 1 49 CAI9540006.1 unnamed protein product, partial [Staurois parvus] diamond 147 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
30029282 30029282 PRJNA454503_P_NODE_78231_length_204_cov_0.909091_g77902_i0 PRJNA454503 78231 204 0.909091 1.85454564 root 1 Root_unresolved Root_unresolved 140 4.1699999999999995e-37   NR XP_030110853.2 10090 g77902 i0 98.5 17 68 1 100 0 1 204 139 206 XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus] diamond 3468 140 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
30676307 30676307 PRJNA454503_P_NODE_84373_length_202_cov_0.921986_g84044_i0 PRJNA454503 84373 202 0.921986 1.86241172 Styela clava 7725 Chordata Chordata 90.5 3.21e-19   NR XP_039249987.1 7725 g84044 i0 58.7 0.935643564356436 63 23 89.1 1 200 21 764 826 XP_039249987.1 laminin subunit beta-1-like [Styela clava] diamond 189 90.5 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
30739609 30739609 PRJNA454503_P_NODE_58154_length_210_cov_0.872483_g57825_i0 PRJNA454503 58154 210 0.872483 1.8322143 Callorhinchus milii 7868 Chordata Chordata 50.8 3.42e-5   NR XP_042201202.1 7868 g57825 i0 45.7 1.31428571428571 92 26 97.1 3 205 2 1360 1451 XP_042201202.1 LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK [Callorhinchus milii] diamond 276 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Chimaeriformes Callorhinchidae Callorhinchus Callorhinchus milii
30865957 30865957 PRJNA454503_P_NODE_77714_length_204_cov_0.909091_g77385_i0 PRJNA454503 77714 204 0.909091 1.85454564 Mirounga angustirostris 9716 Chordata Chordata 43.9 0.00854   NR XP_064453932.1 9716 g77385 i0 53.3 1.22058823529412 45 12 55.9 2 122 9 386 428 XP_064453932.1 xaa-Arg dipeptidase isoform X1 [Mirounga angustirostris] diamond 249 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Mirounga Mirounga angustirostris
31024062 31024062 PRJNA454503_P_NODE_88755_length_193_cov_2.780303_g88426_i0 PRJNA454503 88755 193 2.780303 5.36598479 Ursus maritimus 29073 Chordata Chordata 44.3 0.00374   NR XP_008684902.2 29073 g88426 i0 75 0.373056994818653 24 6 37.3 0 2 73 41 64 XP_008684902.2 LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3H [Ursus maritimus] diamond 72 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ursus Ursus maritimus
31149943 31149943 PRJNA454503_P_NODE_48095_length_217_cov_2.480769_g47766_i0 PRJNA454503 48095 217 2.480769 5.38326873 Grus japonensis 30415 Chordata Chordata 79.7 2.42e-15   NR GAB0203562.1 30415 g47766 i0 59.7 10.2857142857143 62 23 82.9 1 18 197 449 510 GAB0203562.1 mitochondrial enolase superfamily member 1 [Grus japonensis] diamond 2232 79.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Gruiformes Gruidae Grus Grus japonensis
31245160 31245160 PRJNA454503_P_NODE_85475_length_202_cov_0.921986_g85146_i0 PRJNA454503 85475 202 0.921986 1.86241172 Gallus gallus 9031 Chordata Chordata 46.6 9.47e-4   NR XP_040520564.1 9031 g85146 i0 51.1 1.33663366336634 45 22 66.8 0 148 14 234 278 XP_040520564.1 translation initiation factor IF-2-like isoform X2 [Gallus gallus] diamond 270 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Gallus Gallus gallus
31498424 31498424 PRJNA454503_P_NODE_79076_length_204_cov_0.909091_g78747_i0 PRJNA454503 79076 204 0.909091 1.85454564 Staurois parvus 386267 Chordata Chordata 53.9 2.59e-7   NR CAI9618505.1 386267 g78747 i0 40.6 2.20588235294118 69 36 97.1 2 5 202 20 86 CAI9618505.1 unnamed protein product, partial [Staurois parvus] diamond 450 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
31624717 31624717 PRJNA454503_P_NODE_78836_length_204_cov_0.909091_g78507_i0 PRJNA454503 78836 204 0.909091 1.85454564 Crocuta crocuta 9678 Chordata Chordata 46.6 2.58e-4   NR KAF0887361.1 9678 g78507 i0 48.6 1.17647058823529 37 19 54.4 0 43 153 18 54 KAF0887361.1 LORF2 protein, partial [Crocuta crocuta] diamond 240 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
31893971 31893971 PRJNA454503_P_NODE_43597_length_222_cov_2.291925_g43268_i0 PRJNA454503 43597 222 2.291925 5.0880735 Mammalia 40674 Chordata Chordata 48.9 1.55e-4   NR KAF6489890.1 27622 g43268 i0 56.8 2.05405405405405 37 16 50 0 167 57 103 139 KAF6489890.1 hypothetical protein HJG59_010292 [Molossus molossus] diamond 456 49.3 0.991886409736308 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Molossidae Molossus Molossus molossus
31940919 31940919 PRJNA454503_P_NODE_73077_length_205_cov_2.541667_g72748_i0 PRJNA454503 73077 205 2.541667 5.21041735 Bambusicola thoracicus 9083 Chordata Chordata 50.1 1.48e-5   NR POI25208.1 9083 g72748 i0 91.3 0.336585365853659 23 2 33.7 0 203 135 111 133 POI25208.1 hypothetical protein CIB84_011042 [Bambusicola thoracicus] diamond 69 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Bambusicola Bambusicola thoracicus
32131128 32131128 PRJNA454503_P_NODE_48338_length_217_cov_1.666667_g48009_i0 PRJNA454503 48338 217 1.666667 3.61666739 Rissa tridactyla 75485 Chordata Chordata 43.5 0.0138   NR XP_054048015.1 75485 g48009 i0 55 1.65898617511521 40 17 53.9 1 179 63 244 283 XP_054048015.1 integral membrane protein GPR180 isoform X1 [Rissa tridactyla] diamond 360 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Laridae Rissa Rissa tridactyla
32590201 32590201 PRJNA454503_P_NODE_68499_length_207_cov_0.890411_g68170_i0 PRJNA454503 68499 207 0.890411 1.84315077 Aves 8782 Chordata Chordata 44.3 9.1e-4   NR CAK6570027.1 9079 g68170 i0 69 2.27536231884058 29 9 42 0 104 190 49 77 CAK6570027.1 unnamed protein product [Alectoris rufa] diamond 471 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Alectoris Alectoris rufa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;