RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA454503" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA454503 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27012802 27012802 PRJNA454503_P_NODE_44842_length_221_cov_1.625000_g44513_i0 PRJNA454503 44842 221 1.625 3.59125 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 154 2.05e-41   NR MBI1146900.1 2026720 g44513 i0 98.6 0.990950226244344 73 1 99.1 0 219 1 485 557 MBI1146900.1 M1 family metallopeptidase [Candidatus Saccharibacteria bacterium] diamond 219 154 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28592124 28592124 PRJNA454503_P_NODE_29227_length_240_cov_1.871508_g28898_i0 PRJNA454503 29227 240 1.871508 4.4916192 Candidatus Saccharibacteria bacterium GW2 1619071 Bacteria Bacteria 114 2.11e-27   NR KKW03366.1 1619071 g28898 i0 70 2 80 24 100 0 240 1 30 109 KKW03366.1 MAG: ATP-dependent metalloprotease FtsH [Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9] diamond 480 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9
28939476 28939476 PRJNA454503_P_NODE_66888_length_207_cov_1.780822_g66559_i0 PRJNA454503 66888 207 1.780822 3.68630154 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 120 6.28e-30   NR MBB1531810.1 2026720 g66559 i0 91.3 2 69 6 100 0 1 207 56 124 MBB1531810.1 PAS domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 414 120 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;