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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA454503" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJNA454503 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26949494 26949494 PRJNA454503_P_NODE_71822_length_206_cov_0.896552_g71493_i0 PRJNA454503 71822 206 0.896552 1.84689712 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 44.7 0.00459   NR MEK7331166.1 2212470 g71493 i0 45.5 0.961165048543689 66 28 94.7 2 196 2 230 288 MEK7331166.1 hypothetical protein [Candidatus Eiseniibacteriota bacterium] diamond 198 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
27012802 27012802 PRJNA454503_P_NODE_44842_length_221_cov_1.625000_g44513_i0 PRJNA454503 44842 221 1.625 3.59125 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 154 2.05e-41   NR MBI1146900.1 2026720 g44513 i0 98.6 0.990950226244344 73 1 99.1 0 219 1 485 557 MBI1146900.1 M1 family metallopeptidase [Candidatus Saccharibacteria bacterium] diamond 219 154 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27771304 27771304 PRJNA454503_P_NODE_79224_length_204_cov_0.909091_g78895_i0 PRJNA454503 79224 204 0.909091 1.85454564 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 42 0.0418   NR NPV13357.1 2052148 g78895 i0 38.5 0.764705882352941 52 30 73.5 1 182 33 279 330 NPV13357.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 156 42 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
28592124 28592124 PRJNA454503_P_NODE_29227_length_240_cov_1.871508_g28898_i0 PRJNA454503 29227 240 1.871508 4.4916192 Candidatus Saccharibacteria bacterium GW2 1619071 Bacteria Bacteria 114 2.11e-27   NR KKW03366.1 1619071 g28898 i0 70 2 80 24 100 0 240 1 30 109 KKW03366.1 MAG: ATP-dependent metalloprotease FtsH [Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9] diamond 480 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9
28876148 28876148 PRJNA454503_P_NODE_41228_length_225_cov_1.756098_g40899_i0 PRJNA454503 41228 225 1.756098 3.9512205 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 122 7.479999999999999e-31   NR MBP9779874.1 2044595 g40899 i0 87.7 0.866666666666667 65 8 86.7 0 197 3 1 65 MBP9779874.1 glycine--tRNA ligase [Candidatus Altimarinota bacterium] diamond 195 122 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28939476 28939476 PRJNA454503_P_NODE_66888_length_207_cov_1.780822_g66559_i0 PRJNA454503 66888 207 1.780822 3.68630154 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 120 6.28e-30   NR MBB1531810.1 2026720 g66559 i0 91.3 2 69 6 100 0 1 207 56 124 MBB1531810.1 PAS domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 414 120 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30771420 30771420 PRJNA454503_P_NODE_9654_length_360_cov_1.334448_g9325_i0 PRJNA454503 9654 360 1.334448 4.8040128 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 50.1 7.2e-5   NR MBN1151167.1 2052148 g9325 i0 47.4 0.316666666666667 38 20 31.7 0 308 195 36 73 MBN1151167.1 cytochrome b5 domain-containing protein [candidate division WOR-3 bacterium] diamond 114 50.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30834432 30834432 PRJNA454503_P_NODE_69194_length_207_cov_0.890411_g68865_i0 PRJNA454503 69194 207 0.890411 1.84315077 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 49.7 8.3e-5   NR HET9853444.1 2072417 g68865 i0 48.1 0.753623188405797 52 27 75.4 0 3 158 1181 1232 HET9853444.1 GAF domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 156 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31149935 31149935 PRJNA454503_P_NODE_29035_length_241_cov_1.000000_g28706_i0 PRJNA454503 29035 241 1 2.41 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42.4 0.0487   NR HUC89337.1 2052139 g28706 i0 36.1 0.896265560165975 72 45 89.6 1 12 227 565 635 HUC89337.1 type IV secretion system DNA-binding domain-containing protein [Patescibacteria group bacterium] diamond 216 42.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;